Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Trim47Q8C0E3 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Trim47Q8C0E3 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.9□□□□□ -1.31
Trim47Q8C0E3 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.9□□□□□ -1.31
Trim47Q8C0E3 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Trim47Q8C0E3 Gm20667-201ENSMUST00000175674 1930 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm42440-201ENSMUST00000197906 2284 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm7931-201ENSMUST00000121537 271 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm24909-201ENSMUST00000157290 280 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm24419-201ENSMUST00000157875 332 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Mir6973b-201ENSMUST00000184185 80 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm8241-201ENSMUST00000189286 816 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm5731-201ENSMUST00000190969 481 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm37966-201ENSMUST00000193122 326 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm37477-201ENSMUST00000195215 884 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm5551-201ENSMUST00000199720 690 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm44779-201ENSMUST00000206937 708 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm45614-201ENSMUST00000209994 721 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm18696-201ENSMUST00000220103 274 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm9088-201ENSMUST00000220237 508 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm18628-201ENSMUST00000220584 475 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm43843-201ENSMUST00000202396 1587 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm7195-201ENSMUST00000190869 1707 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim47Q8C0E3 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 AC164297.6-201ENSMUST00000224643 1568 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm24434-201ENSMUST00000104081 132 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm13475-201ENSMUST00000119290 234 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm11344-201ENSMUST00000122011 335 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm23332-201ENSMUST00000157424 275 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm3091-201ENSMUST00000163408 484 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm6541-201ENSMUST00000165542 561 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm29134-201ENSMUST00000186579 126 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm9569-201ENSMUST00000187492 787 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm29650-201ENSMUST00000188485 742 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm7858-201ENSMUST00000190177 622 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm28241-201ENSMUST00000190916 235 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm3351-201ENSMUST00000193454 505 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm6631-201ENSMUST00000193699 559 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm17781-201ENSMUST00000195232 649 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm43561-201ENSMUST00000199866 448 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm17956-201ENSMUST00000199931 838 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm45063-201ENSMUST00000203726 472 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms