Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.46□□□□□ -1.54
Usp49Q6P9L4 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC5.46□□□□□ -1.54
Usp49Q6P9L4 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Usp49Q6P9L4 AC159297.2-201ENSMUST00000219567 1075 ntBASIC5.46□□□□□ -1.54
Usp49Q6P9L4 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.46□□□□□ -1.54
Usp49Q6P9L4 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.46□□□□□ -1.54
Usp49Q6P9L4 AC168880.1-201ENSMUST00000225113 707 ntBASIC5.46□□□□□ -1.54
Usp49Q6P9L4 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Usp49Q6P9L4 Gm6369-201ENSMUST00000069626 412 ntBASIC5.46□□□□□ -1.54
Usp49Q6P9L4 Gm5471-201ENSMUST00000072732 337 ntBASIC5.46□□□□□ -1.54
Usp49Q6P9L4 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Usp49Q6P9L4 Gm26072-201ENSMUST00000083135 107 ntBASIC5.46□□□□□ -1.54
Usp49Q6P9L4 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Usp49Q6P9L4 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
Usp49Q6P9L4 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Usp49Q6P9L4 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Usp49Q6P9L4 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.46□□□□□ -1.54
Usp49Q6P9L4 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm14575-201ENSMUST00000117210 560 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm12285-201ENSMUST00000117347 233 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm11742-201ENSMUST00000119903 233 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm14619-201ENSMUST00000120480 168 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm13132-201ENSMUST00000121194 472 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm14623-201ENSMUST00000121398 603 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm26310-201ENSMUST00000157766 117 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm25655-201ENSMUST00000158465 290 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm22326-201ENSMUST00000158897 351 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm9457-201ENSMUST00000180176 372 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm5734-201ENSMUST00000189787 913 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm20203-201ENSMUST00000192352 332 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm43345-201ENSMUST00000199484 269 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm18791-201ENSMUST00000204611 726 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm45382-201ENSMUST00000210607 151 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 AC154838.1-201ENSMUST00000228944 911 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm23796-201ENSMUST00000084011 160 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm44800-201ENSMUST00000207510 1855 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp49Q6P9L4 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.45□□□□□ -1.54
Usp49Q6P9L4 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp49Q6P9L4 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.44□□□□□ -1.54
Usp49Q6P9L4 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
Usp49Q6P9L4 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Gm24160-201ENSMUST00000104594 126 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Gm11970-201ENSMUST00000116105 320 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Gm12090-201ENSMUST00000118692 758 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Gm7312-201ENSMUST00000118798 469 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Gm14989-201ENSMUST00000120497 207 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Gm24840-201ENSMUST00000122603 147 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Gm22277-201ENSMUST00000157204 277 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Gm24931-201ENSMUST00000158324 107 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Usp49Q6P9L4 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Mir6926-201ENSMUST00000184562 68 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Gm45032-201ENSMUST00000205375 520 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Gm9373-201ENSMUST00000208724 599 ntBASIC5.44□□□□□ -1.54
Usp49Q6P9L4 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms