Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 AC134864.1-201ENSMUST00000226326 511 ntBASIC6.35□□□□□ -1.39
Trim28Q62318 AC114916.1-201ENSMUST00000228465 494 ntBASIC6.35□□□□□ -1.39
Trim28Q62318 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim28Q62318 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim28Q62318 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim28Q62318 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim28Q62318 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim28Q62318 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim28Q62318 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim28Q62318 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim28Q62318 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim28Q62318 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim28Q62318 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim28Q62318 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim28Q62318 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim28Q62318 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trim28Q62318 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Trim28Q62318 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim28Q62318 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trim28Q62318 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Trim28Q62318 Gm13195-201ENSMUST00000117229 261 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Gm14795-201ENSMUST00000118461 471 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Gm12465-201ENSMUST00000118591 300 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Gm11313-201ENSMUST00000118779 432 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim28Q62318 Gm12231-201ENSMUST00000119447 695 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Gm8430-201ENSMUST00000119780 471 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Gm14065-201ENSMUST00000120848 585 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Gm13132-201ENSMUST00000121194 472 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Gm12041-201ENSMUST00000121606 602 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim28Q62318 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim28Q62318 Gm24498-201ENSMUST00000158445 102 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Gm22940-201ENSMUST00000158560 155 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Gm16563-201ENSMUST00000162673 423 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim28Q62318 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Trim28Q62318 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC6.34□□□□□ -1.39
Trim28Q62318 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim28Q62318 Gm29138-201ENSMUST00000191444 348 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Gm38166-201ENSMUST00000191660 471 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC6.34□□□□□ -1.39
Trim28Q62318 Gm9057-201ENSMUST00000198791 296 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Gm18611-201ENSMUST00000200334 1118 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Gm46327-201ENSMUST00000218240 365 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trim28Q62318 Gm4263-201ENSMUST00000220693 1101 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Gm32300-201ENSMUST00000221735 515 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 AC164116.2-201ENSMUST00000225398 1038 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Trim28Q62318 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Trim28Q62318 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim28Q62318 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trim28Q62318 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Trim28Q62318 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Trim28Q62318 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim28Q62318 Gm5583-201ENSMUST00000174328 1519 ntBASIC6.34□□□□□ -1.39
Trim28Q62318 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trim28Q62318 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.4
Trim28Q62318 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Trim28Q62318 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Trim28Q62318 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Trim28Q62318 AC123705.3-201ENSMUST00000223531 2069 ntBASIC6.34□□□□□ -1.4
Trim28Q62318 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim28Q62318 AC124426.1-203ENSMUST00000221814 1362 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 Gm10933-201ENSMUST00000221891 1861 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim28Q62318 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 Gm22657-201ENSMUST00000104197 132 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 Gm15488-201ENSMUST00000121682 670 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
Trim28Q62318 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.33□□□□□ -1.4
Trim28Q62318 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim28Q62318 Gm25923-201ENSMUST00000158312 138 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 Gm21856-201ENSMUST00000187547 696 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
Trim28Q62318 Gm21735-201ENSMUST00000190360 696 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 Gm38046-201ENSMUST00000192733 550 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC6.33□□□□□ -1.4
Trim28Q62318 Gm5288-201ENSMUST00000198323 1119 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 AC120011.1-201ENSMUST00000202147 744 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 Gm31520-201ENSMUST00000203048 733 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim28Q62318 Gm18645-201ENSMUST00000209593 651 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim28Q62318 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim28Q62318 Gm3912-203ENSMUST00000211024 367 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim28Q62318 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
Trim28Q62318 AC140210.1-201ENSMUST00000224961 534 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 AC158955.1-201ENSMUST00000227140 385 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim28Q62318 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC6.33□□□□□ -1.4
Trim28Q62318 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Trim28Q62318 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC6.33□□□□□ -1.4
Trim28Q62318 Gm22575-201ENSMUST00000082981 110 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms