Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.19□□□□□ -1.58
Ccbe1Q3MI99 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.19□□□□□ -1.58
Ccbe1Q3MI99 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ccbe1Q3MI99 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Ccbe1Q3MI99 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.19□□□□□ -1.58
Ccbe1Q3MI99 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm25943-201ENSMUST00000103791 90 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Mir466b-7-201ENSMUST00000103804 88 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Mir466b-5-201ENSMUST00000103900 88 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm22267-201ENSMUST00000104008 131 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm25785-201ENSMUST00000104129 125 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm13711-201ENSMUST00000119708 453 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm12262-201ENSMUST00000119915 305 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm11504-201ENSMUST00000120211 173 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm15926-201ENSMUST00000120492 550 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm11341-201ENSMUST00000122316 447 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm4660-201ENSMUST00000131499 403 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Mup-ps4-201ENSMUST00000151005 539 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm23505-201ENSMUST00000158989 130 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm10177-201ENSMUST00000160052 444 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm8221-201ENSMUST00000178052 564 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Mir466b-4-201ENSMUST00000178801 90 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm25285-201ENSMUST00000178951 90 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Mir466b-6-201ENSMUST00000180061 90 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Mir466c-2-201ENSMUST00000180211 90 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm5345-201ENSMUST00000183076 1014 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm43828-201ENSMUST00000196890 639 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm44376-201ENSMUST00000197570 128 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm42443-201ENSMUST00000198084 1155 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm43762-201ENSMUST00000201521 295 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm44163-201ENSMUST00000205140 475 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm45870-201ENSMUST00000211269 601 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm3690-201ENSMUST00000211341 262 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Gm19181-201ENSMUST00000218891 940 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Mir16-2-201ENSMUST00000083672 95 ntBASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccbe1Q3MI99 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Gm24069-201ENSMUST00000104512 127 ntBASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Gm12643-201ENSMUST00000116078 374 ntBASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Gm13579-201ENSMUST00000118519 517 ntBASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Gm12850-201ENSMUST00000119210 436 ntBASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Gm15390-201ENSMUST00000120323 738 ntBASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Gm6977-201ENSMUST00000121568 512 ntBASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Gm12101-201ENSMUST00000121590 390 ntBASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Gm14977-201ENSMUST00000121626 812 ntBASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Gm3160-201ENSMUST00000128343 607 ntBASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Gm23981-201ENSMUST00000157136 106 ntBASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Gm10410-201ENSMUST00000180138 384 ntBASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Gm9457-201ENSMUST00000180176 372 ntBASIC5.17□□□□□ -1.58
Ccbe1Q3MI99 Gm11392-201ENSMUST00000181419 710 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms