Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm14840-201ENSMUST00000122135 594 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm25150-201ENSMUST00000157121 60 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm16378-201ENSMUST00000179168 342 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm27315-201ENSMUST00000183977 154 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm19280-201ENSMUST00000190191 205 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm28639-201ENSMUST00000191519 481 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm38150-201ENSMUST00000192996 452 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Mir142-201ENSMUST00000198092 64 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm19617-201ENSMUST00000202977 308 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm44879-201ENSMUST00000207007 503 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm8106-201ENSMUST00000213123 523 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 AC138284.5-201ENSMUST00000214389 652 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm9512-201ENSMUST00000223112 497 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm5215-201ENSMUST00000054380 405 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ptchd3Q0EEE2 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm23537-201ENSMUST00000157536 330 ntBASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm17044-201ENSMUST00000168549 828 ntBASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm27543-201ENSMUST00000183562 177 ntBASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm8669-201ENSMUST00000183839 945 ntBASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm17953-201ENSMUST00000192061 667 ntBASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm18036-201ENSMUST00000195256 272 ntBASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm44456-201ENSMUST00000196554 89 ntBASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ptchd3Q0EEE2 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.53□□□□□ -1.69
Ptchd3Q0EEE2 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
Ptchd3Q0EEE2 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ptchd3Q0EEE2 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms