Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.64□□□□□ -1.51
Msx2Q03358 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Msx2Q03358 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Msx2Q03358 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.64□□□□□ -1.51
Msx2Q03358 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Msx2Q03358 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Msx2Q03358 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Msx2Q03358 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Msx2Q03358 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.64□□□□□ -1.51
Msx2Q03358 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Msx2Q03358 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Msx2Q03358 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Msx2Q03358 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Msx2Q03358 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Msx2Q03358 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Msx2Q03358 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Msx2Q03358 Gm22267-201ENSMUST00000104008 131 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm15400-201ENSMUST00000118944 601 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm15113-201ENSMUST00000119280 836 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm6744-201ENSMUST00000119303 543 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm14267-201ENSMUST00000119751 496 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm12515-201ENSMUST00000120116 361 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm25782-201ENSMUST00000122526 289 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.63□□□□□ -1.51
Msx2Q03358 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC5.63□□□□□ -1.51
Msx2Q03358 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC5.63□□□□□ -1.51
Msx2Q03358 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC5.63□□□□□ -1.51
Msx2Q03358 Mir1960-201ENSMUST00000157488 78 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm23279-201ENSMUST00000157912 97 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm9285-201ENSMUST00000177691 697 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm26970-201ENSMUST00000182990 964 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.63□□□□□ -1.51
Msx2Q03358 Mir6908-201ENSMUST00000184056 63 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm29124-201ENSMUST00000186576 452 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm5116-201ENSMUST00000187732 463 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm29627-201ENSMUST00000187984 463 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC5.63□□□□□ -1.51
Msx2Q03358 Gm10193-201ENSMUST00000188288 231 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.63□□□□□ -1.51
Msx2Q03358 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC5.63□□□□□ -1.51
Msx2Q03358 Ighv1-21-201ENSMUST00000194856 351 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC5.63□□□□□ -1.51
Msx2Q03358 Gm44149-201ENSMUST00000204256 226 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.63□□□□□ -1.51
Msx2Q03358 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm45171-201ENSMUST00000206360 736 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Msx2Q03358 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Msx2Q03358 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Msx2Q03358 Gm6171-201ENSMUST00000220760 645 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm4263-202ENSMUST00000221392 667 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Msx2Q03358 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Msx2Q03358 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Msx2Q03358 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Msx2Q03358 Mir325-201ENSMUST00000083491 98 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Olfr519-201ENSMUST00000084752 960 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.63□□□□□ -1.51
Msx2Q03358 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Msx2Q03358 Gm45577-201ENSMUST00000210206 2287 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.63□□□□□ -1.51
Msx2Q03358 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Msx2Q03358 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Msx2Q03358 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Msx2Q03358 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Msx2Q03358 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Msx2Q03358 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Msx2Q03358 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msx2Q03358 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Msx2Q03358 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msx2Q03358 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Msx2Q03358 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Msx2Q03358 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Msx2Q03358 Gm22499-201ENSMUST00000104501 135 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Gm25346-201ENSMUST00000104509 128 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.62□□□□□ -1.51
Msx2Q03358 Gm14852-201ENSMUST00000120065 647 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Gm15014-201ENSMUST00000120742 258 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Msx2Q03358 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.62□□□□□ -1.51
Msx2Q03358 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Msx2Q03358 Gm26162-201ENSMUST00000157793 132 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Gm25374-201ENSMUST00000158158 101 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Gm23568-201ENSMUST00000177960 92 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Gm24829-201ENSMUST00000179245 92 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC5.62□□□□□ -1.51
Msx2Q03358 Trbv8-201ENSMUST00000194020 285 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Ighv1-30-201ENSMUST00000194082 349 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Gm44373-201ENSMUST00000196112 169 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Msx2Q03358 Gm42437-201ENSMUST00000197263 923 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC5.62□□□□□ -1.51
Msx2Q03358 Gm44147-201ENSMUST00000204658 94 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC5.62□□□□□ -1.51
Msx2Q03358 Gm45857-201ENSMUST00000212207 356 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms