Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm43668-201ENSMUST00000197014 5342 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm2033-201ENSMUST00000210753 2287 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm43209-201ENSMUST00000198949 1588 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm15385-201ENSMUST00000118725 667 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm22613-201ENSMUST00000122679 292 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm5963-201ENSMUST00000143451 236 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm22211-201ENSMUST00000158097 156 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm26362-201ENSMUST00000158865 315 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm22243-201ENSMUST00000178754 120 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm27976-201ENSMUST00000183635 162 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm29148-201ENSMUST00000188140 336 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm43604-201ENSMUST00000199799 705 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm44650-201ENSMUST00000206929 194 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm45434-201ENSMUST00000210550 293 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm7093-201ENSMUST00000223004 581 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 AC154592.1-201ENSMUST00000225784 574 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 AC129935.1-201ENSMUST00000226302 873 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm6863-201ENSMUST00000052882 636 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm23928-201ENSMUST00000082469 145 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 n-R5s3-201ENSMUST00000083879 112 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm45854-201ENSMUST00000211857 3488 ntBASIC3.95□□□□□ -1.78
Nkx3-1P97436 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx3-1P97436 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm37363-201ENSMUST00000192336 2233 ntBASIC3.94□□□□□ -1.78
Nkx3-1P97436 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Nkx3-1P97436 AC113059.3-201ENSMUST00000217423 2777 ntBASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm37762-201ENSMUST00000194515 3561 ntBASIC3.94□□□□□ -1.78
Nkx3-1P97436 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm14655-201ENSMUST00000120124 578 ntBASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm11510-201ENSMUST00000120278 347 ntBASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm4912-201ENSMUST00000122212 1044 ntBASIC3.94□□□□□ -1.78
Nkx3-1P97436 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm21617-201ENSMUST00000188297 691 ntBASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm29793-201ENSMUST00000202874 460 ntBASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.94□□□□□ -1.78
Nkx3-1P97436 AC154296.3-201ENSMUST00000214427 712 ntBASIC3.94□□□□□ -1.78
Nkx3-1P97436 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm36298-201ENSMUST00000223394 1732 ntBASIC3.94□□□□□ -1.78
Nkx3-1P97436 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm21037-201ENSMUST00000209086 2608 ntBASIC3.94□□□□□ -1.78
Nkx3-1P97436 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm43844-201ENSMUST00000202926 5605 ntBASIC3.94□□□□□ -1.78
Nkx3-1P97436 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Nkx3-1P97436 Gm37311-201ENSMUST00000195541 2024 ntBASIC3.94□□□□□ -1.78
Nkx3-1P97436 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Nkx3-1P97436 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Nkx3-1P97436 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Nkx3-1P97436 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Nkx3-1P97436 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Nkx3-1P97436 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Nkx3-1P97436 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC3.93□□□□□ -1.78
Nkx3-1P97436 Gm23481-201ENSMUST00000104173 131 ntBASIC3.93□□□□□ -1.78
Nkx3-1P97436 Gm23178-201ENSMUST00000116782 95 ntBASIC3.93□□□□□ -1.78
Nkx3-1P97436 Gm14753-201ENSMUST00000118503 246 ntBASIC3.93□□□□□ -1.78
Nkx3-1P97436 Gm7363-201ENSMUST00000119883 399 ntBASIC3.93□□□□□ -1.78
Nkx3-1P97436 Amd-ps1-201ENSMUST00000120127 994 ntBASIC3.93□□□□□ -1.78
Nkx3-1P97436 Gm14881-201ENSMUST00000120366 372 ntBASIC3.93□□□□□ -1.78
Nkx3-1P97436 Gm14303-201ENSMUST00000121320 171 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms