Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.33□□□□□ -1.72
Cdx2P43241 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Cdx2P43241 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Cdx2P43241 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Cdx2P43241 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Cdx2P43241 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Cdx2P43241 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Cdx2P43241 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx2P43241 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Cdx2P43241 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx2P43241 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Cdx2P43241 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Gm37488-201ENSMUST00000195434 3374 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Cdx2P43241 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Cdx2P43241 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.32□□□□□ -1.72
Cdx2P43241 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cdx2P43241 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.32□□□□□ -1.72
Cdx2P43241 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Cdx2P43241 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx2P43241 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.32□□□□□ -1.72
Cdx2P43241 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdx2P43241 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdx2P43241 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx2P43241 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.32□□□□□ -1.72
Cdx2P43241 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx2P43241 Mir551b-201ENSMUST00000102165 98 ntBASIC4.32□□□□□ -1.72
Cdx2P43241 Gm12486-201ENSMUST00000120887 541 ntBASIC4.32□□□□□ -1.72
Cdx2P43241 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.32□□□□□ -1.72
Cdx2P43241 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx2P43241 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx2P43241 Gm20657-201ENSMUST00000177079 515 ntBASIC4.32□□□□□ -1.72
Cdx2P43241 Gm26993-201ENSMUST00000182766 789 ntBASIC4.32□□□□□ -1.72
Cdx2P43241 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdx2P43241 Gm37857-201ENSMUST00000191784 1199 ntBASIC4.32□□□□□ -1.72
Cdx2P43241 Gm38270-201ENSMUST00000192721 407 ntBASIC4.32□□□□□ -1.72
Cdx2P43241 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC4.32□□□□□ -1.72
Cdx2P43241 Gm5284-201ENSMUST00000199053 903 ntBASIC4.32□□□□□ -1.72
Cdx2P43241 Gm4501-201ENSMUST00000207330 551 ntBASIC4.32□□□□□ -1.72
Cdx2P43241 Gm4558-201ENSMUST00000207886 521 ntBASIC4.32□□□□□ -1.72
Cdx2P43241 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.32□□□□□ -1.72
Cdx2P43241 AC122301.1-201ENSMUST00000219625 507 ntBASIC4.32□□□□□ -1.72
Cdx2P43241 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx2P43241 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cdx2P43241 Gm10042-201ENSMUST00000079884 78 ntBASIC4.32□□□□□ -1.72
Cdx2P43241 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cdx2P43241 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx2P43241 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx2P43241 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Cdx2P43241 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
Cdx2P43241 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Cdx2P43241 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx2P43241 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.32□□□□□ -1.72
Cdx2P43241 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Cdx2P43241 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdx2P43241 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.31□□□□□ -1.72
Cdx2P43241 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cdx2P43241 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdx2P43241 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdx2P43241 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
Cdx2P43241 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
Cdx2P43241 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cdx2P43241 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.31□□□□□ -1.72
Cdx2P43241 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.31□□□□□ -1.72
Cdx2P43241 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.31□□□□□ -1.72
Cdx2P43241 Gm23228-201ENSMUST00000157296 270 ntBASIC4.31□□□□□ -1.72
Cdx2P43241 Gm22816-201ENSMUST00000157450 117 ntBASIC4.31□□□□□ -1.72
Cdx2P43241 Gm23554-201ENSMUST00000157818 110 ntBASIC4.31□□□□□ -1.72
Cdx2P43241 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cdx2P43241 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.31□□□□□ -1.72
Cdx2P43241 Mir6537-201ENSMUST00000184150 110 ntBASIC4.31□□□□□ -1.72
Cdx2P43241 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cdx2P43241 Gm44871-201ENSMUST00000207821 497 ntBASIC4.31□□□□□ -1.72
Cdx2P43241 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.31□□□□□ -1.72
Cdx2P43241 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.31□□□□□ -1.72
Cdx2P43241 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.31□□□□□ -1.72
Cdx2P43241 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC4.31□□□□□ -1.72
Cdx2P43241 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cdx2P43241 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.31□□□□□ -1.72
Cdx2P43241 Gm26165-201ENSMUST00000083791 138 ntBASIC4.31□□□□□ -1.72
Cdx2P43241 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdx2P43241 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cdx2P43241 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdx2P43241 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Cdx2P43241 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.31□□□□□ -1.72
Cdx2P43241 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cdx2P43241 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cdx2P43241 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdx2P43241 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdx2P43241 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdx2P43241 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Cdx2P43241 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms