Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm16421-201ENSMUST00000117616 1557 ntBASIC5□□□□□ -1.61
Col2a1P28481 Gm13973-201ENSMUST00000121371 894 ntBASIC5□□□□□ -1.61
Col2a1P28481 Gm13162-201ENSMUST00000121481 454 ntBASIC5□□□□□ -1.61
Col2a1P28481 Gm22986-201ENSMUST00000122753 130 ntBASIC5□□□□□ -1.61
Col2a1P28481 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col2a1P28481 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col2a1P28481 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 Gm29428-201ENSMUST00000190086 409 ntBASIC5□□□□□ -1.61
Col2a1P28481 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col2a1P28481 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col2a1P28481 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 AC150560.2-201ENSMUST00000227208 171 ntBASIC5□□□□□ -1.61
Col2a1P28481 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC5□□□□□ -1.61
Col2a1P28481 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Col2a1P28481 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.99□□□□□ -1.61
Col2a1P28481 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col2a1P28481 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col2a1P28481 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Col2a1P28481 Gm14539-201ENSMUST00000117527 174 ntBASIC4.99□□□□□ -1.61
Col2a1P28481 Gm12340-201ENSMUST00000121617 462 ntBASIC4.99□□□□□ -1.61
Col2a1P28481 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col2a1P28481 Gm22156-201ENSMUST00000158409 141 ntBASIC4.99□□□□□ -1.61
Col2a1P28481 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC4.99□□□□□ -1.61
Col2a1P28481 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col2a1P28481 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.99□□□□□ -1.61
Col2a1P28481 Gm3191-201ENSMUST00000167139 346 ntBASIC4.99□□□□□ -1.61
Col2a1P28481 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col2a1P28481 Gm20239-201ENSMUST00000196610 982 ntBASIC4.99□□□□□ -1.61
Col2a1P28481 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.99□□□□□ -1.61
Col2a1P28481 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.99□□□□□ -1.61
Col2a1P28481 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.99□□□□□ -1.61
Col2a1P28481 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.99□□□□□ -1.61
Col2a1P28481 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col2a1P28481 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.99□□□□□ -1.61
Col2a1P28481 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col2a1P28481 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col2a1P28481 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col2a1P28481 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col2a1P28481 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col2a1P28481 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col2a1P28481 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col2a1P28481 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col2a1P28481 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col2a1P28481 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col2a1P28481 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col2a1P28481 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.98□□□□□ -1.61
Col2a1P28481 Gm23226-201ENSMUST00000116927 103 ntBASIC4.98□□□□□ -1.61
Col2a1P28481 Gm15151-201ENSMUST00000117106 177 ntBASIC4.98□□□□□ -1.61
Col2a1P28481 Gm11398-201ENSMUST00000120330 320 ntBASIC4.98□□□□□ -1.61
Col2a1P28481 Gm15799-201ENSMUST00000120899 289 ntBASIC4.98□□□□□ -1.61
Col2a1P28481 Gm14845-201ENSMUST00000121259 306 ntBASIC4.98□□□□□ -1.61
Col2a1P28481 Gm22958-201ENSMUST00000122512 184 ntBASIC4.98□□□□□ -1.61
Col2a1P28481 Gm23554-201ENSMUST00000157818 110 ntBASIC4.98□□□□□ -1.61
Col2a1P28481 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.98□□□□□ -1.61
Col2a1P28481 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col2a1P28481 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col2a1P28481 Trbv11-201ENSMUST00000194354 260 ntBASIC4.98□□□□□ -1.61
Col2a1P28481 Gm43037-201ENSMUST00000196808 250 ntBASIC4.98□□□□□ -1.61
Col2a1P28481 Gm43855-201ENSMUST00000197462 507 ntBASIC4.98□□□□□ -1.61
Col2a1P28481 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.98□□□□□ -1.61
Col2a1P28481 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.98□□□□□ -1.61
Col2a1P28481 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.98□□□□□ -1.61
Col2a1P28481 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.98□□□□□ -1.61
Col2a1P28481 Gm46998-201ENSMUST00000221444 330 ntBASIC4.98□□□□□ -1.61
Col2a1P28481 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col2a1P28481 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col2a1P28481 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col2a1P28481 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col2a1P28481 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col2a1P28481 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col2a1P28481 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col2a1P28481 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Col2a1P28481 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col2a1P28481 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col2a1P28481 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col2a1P28481 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col2a1P28481 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col2a1P28481 Gm8666-201ENSMUST00000117517 292 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 Gm22314-201ENSMUST00000158007 281 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col2a1P28481 Gm5473-201ENSMUST00000179326 642 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 Gm38201-201ENSMUST00000192143 387 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 Gm36998-201ENSMUST00000193205 704 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 Gm36259-201ENSMUST00000197340 392 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 Gm42579-201ENSMUST00000200512 734 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 Gm44023-201ENSMUST00000203710 469 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms