Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Lire1P11260 Gm42968-201ENSMUST00000198578 1372 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Gm3089-201ENSMUST00000200804 1395 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Gm3302-201ENSMUST00000201462 1395 ntBASIC4.9□□□□□ -1.63
Lire1P11260 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Lire1P11260 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Lire1P11260 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Lire1P11260 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Lire1P11260 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Lire1P11260 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Lire1P11260 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Lire1P11260 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Lire1P11260 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm7079-201ENSMUST00000119726 171 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm14605-201ENSMUST00000120599 268 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm11805-201ENSMUST00000121238 600 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm25291-201ENSMUST00000122795 144 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.89□□□□□ -1.63
Lire1P11260 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC4.89□□□□□ -1.63
Lire1P11260 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Lire1P11260 Gm6486-201ENSMUST00000166202 434 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Lire1P11260 Gm27855-201ENSMUST00000184122 128 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm18117-201ENSMUST00000187720 742 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm29038-201ENSMUST00000191543 678 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.89□□□□□ -1.63
Lire1P11260 Gm38040-201ENSMUST00000193505 225 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm17952-201ENSMUST00000193914 747 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm43765-201ENSMUST00000196303 893 ntBASIC4.89□□□□□ -1.63
Lire1P11260 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Lire1P11260 Gm44349-201ENSMUST00000197048 123 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Lire1P11260 Gm43428-201ENSMUST00000200108 3845 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm7825-201ENSMUST00000204046 416 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm3257-201ENSMUST00000207217 675 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm18468-201ENSMUST00000207321 369 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm18470-201ENSMUST00000207467 420 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm18465-201ENSMUST00000207468 369 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm18464-201ENSMUST00000207803 420 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm18458-201ENSMUST00000207908 369 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm18461-201ENSMUST00000208421 420 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC4.89□□□□□ -1.63
Lire1P11260 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.89□□□□□ -1.63
Lire1P11260 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.89□□□□□ -1.63
Lire1P11260 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Lire1P11260 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC4.89□□□□□ -1.63
Lire1P11260 AC153870.1-201ENSMUST00000219599 560 ntBASIC4.89□□□□□ -1.63
Lire1P11260 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.89□□□□□ -1.63
Lire1P11260 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.89□□□□□ -1.63
Lire1P11260 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.89□□□□□ -1.63
Lire1P11260 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.89□□□□□ -1.63
Lire1P11260 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.89□□□□□ -1.63
Lire1P11260 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Lire1P11260 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Lire1P11260 n-R5s88-201ENSMUST00000083173 118 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Mir31-201ENSMUST00000083474 106 ntBASIC4.89□□□□□ -1.63
Lire1P11260 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Lire1P11260 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Lire1P11260 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Lire1P11260 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.89□□□□□ -1.63
Lire1P11260 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
Lire1P11260 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Lire1P11260 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Lire1P11260 Gm11270-201ENSMUST00000117685 471 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Gm25293-201ENSMUST00000122792 285 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Lire1P11260 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Lire1P11260 Gm27820-201ENSMUST00000183628 175 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Mir7087-201ENSMUST00000184840 70 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Gm37418-201ENSMUST00000195031 274 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Gm43136-201ENSMUST00000200403 636 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Gm6520-201ENSMUST00000200636 410 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Gm5885-202ENSMUST00000203357 528 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Clec2j-202ENSMUST00000203658 606 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Gm44214-201ENSMUST00000204153 606 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Gm44092-201ENSMUST00000204470 258 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Lire1P11260 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Lire1P11260 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.88□□□□□ -1.63
Lire1P11260 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC4.88□□□□□ -1.63
Lire1P11260 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.88□□□□□ -1.63
Lire1P11260 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
Lire1P11260 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC4.88□□□□□ -1.63
Lire1P11260 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
Lire1P11260 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lire1P11260 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Lire1P11260 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Gm43359-201ENSMUST00000197944 2200 ntBASIC4.88□□□□□ -1.63
Lire1P11260 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms