Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm12255-201ENSMUST00000117184 284 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm16089-201ENSMUST00000117679 336 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm11256-201ENSMUST00000118109 829 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm12242-201ENSMUST00000118824 738 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm14013-201ENSMUST00000119006 270 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Apc-ps1-201ENSMUST00000119356 470 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm5166-201ENSMUST00000121332 573 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm12778-201ENSMUST00000122341 333 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm25341-201ENSMUST00000157461 268 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm24439-201ENSMUST00000157894 117 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm25433-201ENSMUST00000158283 286 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm24976-201ENSMUST00000158972 135 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm22990-201ENSMUST00000175427 89 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Mir6363-201ENSMUST00000184880 114 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm28263-201ENSMUST00000185884 400 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm38183-201ENSMUST00000193189 205 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm44111-201ENSMUST00000204649 399 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm45434-201ENSMUST00000210550 293 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm45730-201ENSMUST00000212560 395 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 AC165349.1-201ENSMUST00000217896 424 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm19326-201ENSMUST00000219818 326 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 AC125531.1-201ENSMUST00000219849 221 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 AC124489.3-201ENSMUST00000224037 278 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 AC154834.1-201ENSMUST00000224697 358 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 AC156790.1-201ENSMUST00000226572 559 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm26228-201ENSMUST00000082512 107 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm25080-201ENSMUST00000082526 107 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm25518-201ENSMUST00000083864 107 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm10540-201ENSMUST00000097581 276 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm43557-201ENSMUST00000197100 2370 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm6494-201ENSMUST00000218604 2298 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hoxd3P09027 AC164437.5-201ENSMUST00000227235 4414 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Hoxd3P09027 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Cmah-208ENSMUST00000224819 9482 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 AC174797.5-201ENSMUST00000225055 1860 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Mir875-201ENSMUST00000104698 78 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm12939-201ENSMUST00000117303 165 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm13141-201ENSMUST00000117417 456 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm4234-201ENSMUST00000119747 714 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm14765-201ENSMUST00000121954 326 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm24176-201ENSMUST00000158928 121 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms