Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm14918-201ENSMUST00000118153 268 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm15765-201ENSMUST00000118407 910 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm14842-201ENSMUST00000119577 269 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm13170-201ENSMUST00000119716 643 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm14534-201ENSMUST00000120045 357 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm15181-201ENSMUST00000120142 177 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm11848-201ENSMUST00000121207 973 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm2343-201ENSMUST00000161177 1042 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm16134-201ENSMUST00000161714 336 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm24155-201ENSMUST00000175259 110 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm25942-201ENSMUST00000180080 110 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Mir7093-201ENSMUST00000184195 101 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm17929-201ENSMUST00000186851 627 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm28066-201ENSMUST00000188657 472 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm28116-201ENSMUST00000189064 387 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm43513-201ENSMUST00000199779 1076 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm44219-201ENSMUST00000203005 273 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm44539-201ENSMUST00000206010 238 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 AC102575.1-201ENSMUST00000225348 547 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 n-R5s79-201ENSMUST00000083071 120 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm13733-201ENSMUST00000117290 535 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm13176-201ENSMUST00000117910 477 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm12186-201ENSMUST00000119050 945 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm13998-201ENSMUST00000120952 335 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Mir1960-201ENSMUST00000157488 78 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm24682-201ENSMUST00000158764 137 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm23028-201ENSMUST00000158773 265 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm25874-201ENSMUST00000178030 79 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms