Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC154724.1-201ENSMUST00000225782 821 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm22220-201ENSMUST00000082671 149 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim3Q9R1R2 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm37124-201ENSMUST00000192140 1992 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm24117-201ENSMUST00000103973 133 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm23879-201ENSMUST00000116874 126 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm23467-201ENSMUST00000157127 159 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm24188-201ENSMUST00000157980 108 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm22859-201ENSMUST00000174978 122 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm20674-201ENSMUST00000177452 369 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm9499-201ENSMUST00000180888 964 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm43136-201ENSMUST00000200403 636 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm44879-201ENSMUST00000207007 503 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Trim3Q9R1R2 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm12760-201ENSMUST00000117861 482 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm11366-201ENSMUST00000119279 429 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm16179-201ENSMUST00000120685 373 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm13808-201ENSMUST00000121353 184 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm13149-201ENSMUST00000122071 339 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm25966-201ENSMUST00000157169 117 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm25432-201ENSMUST00000158284 66 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm37070-201ENSMUST00000193272 460 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm44648-201ENSMUST00000208267 329 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 AC172027.1-201ENSMUST00000217659 337 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm16415-201ENSMUST00000080097 489 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Gm10916-201ENSMUST00000080330 483 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms