Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Gm43596-201ENSMUST00000202818 884 ntBASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Gm4290-201ENSMUST00000206897 814 ntBASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Gm45610-201ENSMUST00000209227 784 ntBASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Gm17779-201ENSMUST00000213395 394 ntBASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Upk3aQ9JKX8 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Zakit-201ENSMUST00000157677 308 ntBASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Gm16545-201ENSMUST00000161968 463 ntBASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Gm5258-201ENSMUST00000165437 327 ntBASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Gm37601-201ENSMUST00000194922 394 ntBASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Gm43717-201ENSMUST00000198684 310 ntBASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 AC153870.1-201ENSMUST00000219599 560 ntBASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Upk3aQ9JKX8 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Gm14516-201ENSMUST00000120012 252 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Gm13808-201ENSMUST00000121353 184 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Gm11910-201ENSMUST00000121624 432 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Gm13232-201ENSMUST00000121816 632 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Gm24636-201ENSMUST00000158673 288 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Gm28385-201ENSMUST00000185671 292 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Gm18117-201ENSMUST00000187720 742 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Gm38046-201ENSMUST00000192733 550 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Gm44259-201ENSMUST00000204996 298 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Gm44817-201ENSMUST00000205416 453 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Gm17766-201ENSMUST00000209223 442 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 AC132433.1-201ENSMUST00000221553 1101 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Gm7117-201ENSMUST00000071515 387 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Upk3aQ9JKX8 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms