Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm6501-201ENSMUST00000187178 916 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm28846-201ENSMUST00000189161 368 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm28408-201ENSMUST00000191557 463 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm8747-201ENSMUST00000195392 751 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm44125-201ENSMUST00000203068 448 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm44252-201ENSMUST00000204187 330 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm18423-201ENSMUST00000205144 1074 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm29754-201ENSMUST00000206269 358 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm45405-201ENSMUST00000211544 609 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm18120-201ENSMUST00000220079 511 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm9088-201ENSMUST00000220237 508 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm10568-201ENSMUST00000193244 1634 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm25097-201ENSMUST00000104042 145 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm14933-201ENSMUST00000118840 481 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm11553-201ENSMUST00000120682 240 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm4886-201ENSMUST00000121874 1176 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm25827-201ENSMUST00000157089 107 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm15838-201ENSMUST00000161575 180 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm8161-201ENSMUST00000168739 481 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm22851-201ENSMUST00000178741 94 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm22621-201ENSMUST00000179678 74 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm21088-201ENSMUST00000190875 316 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm36984-201ENSMUST00000192770 235 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm37620-201ENSMUST00000192910 501 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm38008-201ENSMUST00000195333 518 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Igkv4-83-201ENSMUST00000196933 334 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm42443-201ENSMUST00000198084 1155 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm42475-201ENSMUST00000201212 295 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm44161-201ENSMUST00000203532 253 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm44041-201ENSMUST00000203678 396 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm44002-201ENSMUST00000205134 594 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm45700-201ENSMUST00000205866 347 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Olfr575-201ENSMUST00000084812 957 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.95□□□□□ -1.46
Trim39Q9ESN2 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms