Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm13815-201ENSMUST00000119963 412 ntBASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Gm23902-201ENSMUST00000157571 134 ntBASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Gm26085-201ENSMUST00000157900 116 ntBASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Gm3077-201ENSMUST00000165903 627 ntBASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Gm37070-201ENSMUST00000193272 460 ntBASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Gm42720-201ENSMUST00000196813 300 ntBASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Gm45651-201ENSMUST00000210857 335 ntBASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Gm45499-201ENSMUST00000211656 280 ntBASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Gm22350-201ENSMUST00000083924 156 ntBASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Chmp2aQ9DB34 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm15779-201ENSMUST00000117470 412 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm15480-201ENSMUST00000120442 519 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm22383-201ENSMUST00000158188 327 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm26354-201ENSMUST00000158221 129 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm18181-201ENSMUST00000190670 736 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm6057-201ENSMUST00000195927 314 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm17811-201ENSMUST00000206193 387 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm33626-201ENSMUST00000206790 828 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm272-201ENSMUST00000222073 919 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Chmp2aQ9DB34 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm28240-201ENSMUST00000187560 2053 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm22272-201ENSMUST00000104039 134 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm11914-201ENSMUST00000117094 507 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm15421-202ENSMUST00000118224 399 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm8129-201ENSMUST00000118230 213 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm8051-201ENSMUST00000120464 466 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm13932-201ENSMUST00000120873 610 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm24690-201ENSMUST00000157759 97 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm16566-201ENSMUST00000160387 910 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm16378-201ENSMUST00000179168 342 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm27165-201ENSMUST00000183951 232 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm27690-201ENSMUST00000184596 126 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm27564-201ENSMUST00000185196 96 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm37881-201ENSMUST00000193001 421 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Gm37636-201ENSMUST00000193583 359 ntBASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Chmp2aQ9DB34 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms