Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm42896-201ENSMUST00000201249 1113 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm3148-201ENSMUST00000203594 612 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm44132-201ENSMUST00000205142 151 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm3690-201ENSMUST00000211341 262 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm18247-201ENSMUST00000222937 601 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Vmn1r89-206ENSMUST00000227319 985 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 AC151831.1-201ENSMUST00000227609 4033 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm13731-201ENSMUST00000117332 196 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm8424-201ENSMUST00000117716 988 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm14591-201ENSMUST00000120407 518 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm12413-201ENSMUST00000121508 312 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm13738-201ENSMUST00000122437 469 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm6155-201ENSMUST00000173735 341 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm25412-201ENSMUST00000180258 107 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm44634-201ENSMUST00000206119 152 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 AC126275.1-201ENSMUST00000224881 446 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 AC147615.2-201ENSMUST00000219876 2154 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx56Q9D0R4 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Gm14335-201ENSMUST00000119165 810 ntBASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Gm14577-201ENSMUST00000121134 256 ntBASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Gm25660-201ENSMUST00000158470 104 ntBASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Gm2930-201ENSMUST00000170403 474 ntBASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Mir3572-201ENSMUST00000175549 86 ntBASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Amd-ps5-201ENSMUST00000198406 989 ntBASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Gm44571-201ENSMUST00000208092 533 ntBASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 LOC665443-201ENSMUST00000212284 796 ntBASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Gm29884-201ENSMUST00000218403 453 ntBASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 AC117797.2-201ENSMUST00000224419 531 ntBASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 AC154506.3-201ENSMUST00000225417 213 ntBASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 AC160999.1-201ENSMUST00000225675 810 ntBASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ddx56Q9D0R4 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms