Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Gm8145-201ENSMUST00000118220 745 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Gm26098-201ENSMUST00000157247 288 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Gm23250-201ENSMUST00000157444 267 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Gm27036-201ENSMUST00000182465 980 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Mir7008-201ENSMUST00000184398 63 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Gm28830-201ENSMUST00000188192 213 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Gm37881-201ENSMUST00000193001 421 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Gm45498-201ENSMUST00000210346 283 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Gm18899-201ENSMUST00000217663 546 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 AC173345.3-201ENSMUST00000221245 1093 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 AL671874.1-201ENSMUST00000223746 1123 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.35□□□□□ -1.71
Use1Q9CQ56 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Use1Q9CQ56 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
Use1Q9CQ56 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.34□□□□□ -1.71
Use1Q9CQ56 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Use1Q9CQ56 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm13815-201ENSMUST00000119963 412 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC4.34□□□□□ -1.71
Use1Q9CQ56 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm25150-201ENSMUST00000157121 60 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm23700-201ENSMUST00000158842 102 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm16114-201ENSMUST00000161930 300 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm26318-201ENSMUST00000176507 96 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm26828-201ENSMUST00000180640 172 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm42720-201ENSMUST00000196813 300 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm43371-201ENSMUST00000202838 1031 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm18306-201ENSMUST00000207338 569 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Use1Q9CQ56 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm20368-201ENSMUST00000220716 301 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 AC154510.1-201ENSMUST00000223925 737 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Use1Q9CQ56 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Use1Q9CQ56 Svet1-201ENSMUST00000209370 3940 ntBASIC4.34□□□□□ -1.71
Use1Q9CQ56 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Use1Q9CQ56 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Use1Q9CQ56 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Use1Q9CQ56 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Use1Q9CQ56 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.34□□□□□ -1.72
Use1Q9CQ56 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.72
Use1Q9CQ56 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.34□□□□□ -1.72
Use1Q9CQ56 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Use1Q9CQ56 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Use1Q9CQ56 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Use1Q9CQ56 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.33□□□□□ -1.72
Use1Q9CQ56 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Use1Q9CQ56 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Use1Q9CQ56 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Use1Q9CQ56 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.33□□□□□ -1.72
Use1Q9CQ56 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms