Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm14574-201ENSMUST00000120644 279 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm15166-201ENSMUST00000120790 385 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm22312-201ENSMUST00000158005 130 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm25451-201ENSMUST00000177832 121 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm21737-201ENSMUST00000178112 664 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm20874-201ENSMUST00000178356 663 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm21744-201ENSMUST00000178403 662 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm20901-201ENSMUST00000180177 664 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm21399-201ENSMUST00000180210 597 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Mir7687-201ENSMUST00000184722 59 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm27332-201ENSMUST00000184893 112 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm2950-201ENSMUST00000185530 520 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm8392-201ENSMUST00000185647 835 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm18117-201ENSMUST00000187720 742 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm28090-201ENSMUST00000189458 664 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm21647-201ENSMUST00000189755 664 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Mir7116-201ENSMUST00000195956 70 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm42961-201ENSMUST00000202023 181 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm7887-201ENSMUST00000056948 537 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 AC164102.1-201ENSMUST00000220524 1553 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm25097-201ENSMUST00000104042 145 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm11908-201ENSMUST00000117755 347 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm14307-201ENSMUST00000118930 291 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm14835-201ENSMUST00000119039 315 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm12808-201ENSMUST00000120597 404 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm5287-201ENSMUST00000120666 598 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm14297-201ENSMUST00000129110 291 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm25434-201ENSMUST00000158278 167 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm26402-201ENSMUST00000158499 113 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm15838-201ENSMUST00000161575 180 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm27588-201ENSMUST00000185096 263 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm3148-201ENSMUST00000203594 612 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm2011-203ENSMUST00000203750 435 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm44184-201ENSMUST00000204290 132 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm45196-201ENSMUST00000206751 825 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.65□□□□□ -1.5
Nkx6-1Q99MA9 Gm6049-201ENSMUST00000222369 458 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 120.1 ms