Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm28768-201ENSMUST00000189034 378 ntBASIC4.14□□□□□ -1.75
Scrt1Q99M85 Gm29288-201ENSMUST00000191582 901 ntBASIC4.14□□□□□ -1.75
Scrt1Q99M85 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.14□□□□□ -1.75
Scrt1Q99M85 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.14□□□□□ -1.75
Scrt1Q99M85 Gm38221-201ENSMUST00000195146 365 ntBASIC4.14□□□□□ -1.75
Scrt1Q99M85 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.14□□□□□ -1.75
Scrt1Q99M85 Gm43968-201ENSMUST00000203388 389 ntBASIC4.14□□□□□ -1.75
Scrt1Q99M85 Gm19131-201ENSMUST00000203408 789 ntBASIC4.14□□□□□ -1.75
Scrt1Q99M85 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC4.14□□□□□ -1.75
Scrt1Q99M85 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Scrt1Q99M85 Gm19039-201ENSMUST00000204363 575 ntBASIC4.14□□□□□ -1.75
Scrt1Q99M85 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC4.14□□□□□ -1.75
Scrt1Q99M85 Gm45007-201ENSMUST00000206237 366 ntBASIC4.14□□□□□ -1.75
Scrt1Q99M85 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Scrt1Q99M85 Gm6850-201ENSMUST00000210031 530 ntBASIC4.14□□□□□ -1.75
Scrt1Q99M85 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.14□□□□□ -1.75
Scrt1Q99M85 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Scrt1Q99M85 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.14□□□□□ -1.75
Scrt1Q99M85 Olfr480-201ENSMUST00000071658 1029 ntBASIC4.14□□□□□ -1.75
Scrt1Q99M85 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.14□□□□□ -1.75
Scrt1Q99M85 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Scrt1Q99M85 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Scrt1Q99M85 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC4.14□□□□□ -1.75
Scrt1Q99M85 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.14□□□□□ -1.75
Scrt1Q99M85 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Scrt1Q99M85 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.14□□□□□ -1.75
Scrt1Q99M85 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Scrt1Q99M85 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Scrt1Q99M85 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Scrt1Q99M85 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.14□□□□□ -1.75
Scrt1Q99M85 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.14□□□□□ -1.75
Scrt1Q99M85 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm20541-201ENSMUST00000173035 1406 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm14909-201ENSMUST00000117853 351 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm13214-201ENSMUST00000122137 408 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm24745-201ENSMUST00000157840 85 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm24465-201ENSMUST00000178398 107 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Mir6344-201ENSMUST00000183462 104 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm6075-201ENSMUST00000186816 486 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm29479-201ENSMUST00000190352 455 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm43304-201ENSMUST00000196803 326 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 AL645546.2-201ENSMUST00000224526 265 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm10145-201ENSMUST00000077776 462 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm24031-201ENSMUST00000083930 131 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm10705-201ENSMUST00000098980 461 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Scrt1Q99M85 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.12□□□□□ -1.75
Scrt1Q99M85 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Scrt1Q99M85 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Scrt1Q99M85 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.12□□□□□ -1.75
Scrt1Q99M85 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Scrt1Q99M85 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Scrt1Q99M85 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Scrt1Q99M85 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Scrt1Q99M85 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Scrt1Q99M85 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms