Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Robo2-210ENSMUST00000226478 8059 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
Pcdhb7Q8CDY9 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.52□□□□□ -1.36
Pcdhb7Q8CDY9 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm5155-201ENSMUST00000072381 2841 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm26079-201ENSMUST00000104066 133 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm15531-201ENSMUST00000118062 252 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm6987-201ENSMUST00000119319 428 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm16330-201ENSMUST00000128324 297 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm11962-201ENSMUST00000145746 255 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm26321-201ENSMUST00000157740 242 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm22940-201ENSMUST00000158560 155 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm20690-201ENSMUST00000177341 315 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm8941-201ENSMUST00000181451 899 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm26746-201ENSMUST00000181722 487 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm4557-201ENSMUST00000185826 907 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm4526-201ENSMUST00000186039 920 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm8708-201ENSMUST00000188500 906 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm28846-201ENSMUST00000189161 368 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm37272-201ENSMUST00000193401 488 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Ighv1-73-201ENSMUST00000197435 352 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm3549-201ENSMUST00000203873 794 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm44896-201ENSMUST00000206190 772 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
Pcdhb7Q8CDY9 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Gm14631-201ENSMUST00000119067 594 ntBASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Gm13444-201ENSMUST00000119445 522 ntBASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Gm6067-201ENSMUST00000121648 491 ntBASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC6.51□□□□□ -1.37
Pcdhb7Q8CDY9 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms