Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Gm23692-201ENSMUST00000101881 160 ntBASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Gm26377-201ENSMUST00000102184 108 ntBASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Gm14931-201ENSMUST00000111079 253 ntBASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Gm14103-201ENSMUST00000119075 366 ntBASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Gm15034-201ENSMUST00000120043 349 ntBASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Gm16254-201ENSMUST00000131528 730 ntBASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Gm25669-201ENSMUST00000157699 112 ntBASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Gm25655-201ENSMUST00000158465 290 ntBASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Gm42458-201ENSMUST00000201914 369 ntBASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC5.9□□□□□ -1.46
Vps53Q8CCB4 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 CT571256.1-201ENSMUST00000226045 585 ntBASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.9□□□□□ -1.46
Vps53Q8CCB4 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Vps53Q8CCB4 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
Vps53Q8CCB4 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Vps53Q8CCB4 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.9□□□□□ -1.47
Vps53Q8CCB4 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Vps53Q8CCB4 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.9□□□□□ -1.47
Vps53Q8CCB4 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.9□□□□□ -1.47
Vps53Q8CCB4 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Vps53Q8CCB4 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Mir92b-201ENSMUST00000102300 83 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm24350-201ENSMUST00000104163 133 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm12007-201ENSMUST00000120978 597 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm24840-201ENSMUST00000122603 147 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm23700-201ENSMUST00000158842 102 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm19807-201ENSMUST00000173971 667 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm26925-201ENSMUST00000182470 957 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm28384-201ENSMUST00000189079 463 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm5268-201ENSMUST00000189212 940 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm5288-201ENSMUST00000198323 1119 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm18997-201ENSMUST00000216353 822 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm46103-201ENSMUST00000217614 341 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 AC144733.1-201ENSMUST00000222893 1289 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 AC125464.1-201ENSMUST00000228013 512 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Gm13058-201ENSMUST00000117097 1435 ntBASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Vps53Q8CCB4 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms