Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm22235-201ENSMUST00000157085 110 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm22851-201ENSMUST00000178741 94 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm25873-201ENSMUST00000180317 107 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm29229-201ENSMUST00000188874 323 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Ighv3-7-201ENSMUST00000193370 348 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 AC164161.1-201ENSMUST00000214076 639 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm2614-201ENSMUST00000223227 403 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 AC124433.2-201ENSMUST00000223867 291 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 AC102291.2-201ENSMUST00000228083 367 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Olfr881-201ENSMUST00000074611 948 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm37776-201ENSMUST00000193471 2497 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm44675-201ENSMUST00000208188 2927 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm25795-201ENSMUST00000104421 132 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm13510-201ENSMUST00000118659 429 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm14901-201ENSMUST00000119001 283 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm7189-201ENSMUST00000119811 429 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Clec2f-201ENSMUST00000121051 374 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm2768-201ENSMUST00000121062 250 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm14980-201ENSMUST00000121247 736 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm23501-201ENSMUST00000157744 256 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm16164-201ENSMUST00000160078 468 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm4134-201ENSMUST00000173244 563 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm27161-201ENSMUST00000183960 562 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm27653-201ENSMUST00000185037 136 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm29038-201ENSMUST00000191543 678 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm43392-201ENSMUST00000196560 434 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm9173-201ENSMUST00000198054 400 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm7832-201ENSMUST00000202613 880 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm33178-201ENSMUST00000212090 257 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm45789-201ENSMUST00000213038 364 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 AC166358.10-201ENSMUST00000220556 144 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm9292-201ENSMUST00000222008 710 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm9309-201ENSMUST00000223537 546 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 AL672194.1-201ENSMUST00000224841 603 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm22300-201ENSMUST00000082661 126 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Gm10794-201ENSMUST00000099624 207 ntBASIC6.9□□□□□ -1.3
Trim47Q8C0E3 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Trim47Q8C0E3 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Trim47Q8C0E3 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Trim47Q8C0E3 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms