Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Gm3148-201ENSMUST00000203594 612 ntBASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Gm19237-201ENSMUST00000205036 1132 ntBASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 AC174082.1-201ENSMUST00000221106 307 ntBASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Gm25793-201ENSMUST00000083287 107 ntBASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Gm42841-201ENSMUST00000199806 1932 ntBASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Gm42598-201ENSMUST00000200110 2437 ntBASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Sh3rf1Q69ZI1 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Mir759-201ENSMUST00000103254 98 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Gm3940-201ENSMUST00000105087 432 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Gm14173-201ENSMUST00000117690 278 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Gm14897-201ENSMUST00000118213 207 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Gm12880-201ENSMUST00000120652 494 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Magea9-ps-201ENSMUST00000140655 732 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Magea9-ps-202ENSMUST00000167328 899 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Gm29551-201ENSMUST00000190913 698 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Gm8256-203ENSMUST00000228692 591 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr467-201ENSMUST00000084756 927 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Gm42967-201ENSMUST00000198647 2312 ntBASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sh3rf1Q69ZI1 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm43092-201ENSMUST00000202986 1854 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm22952-201ENSMUST00000116720 120 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm13738-201ENSMUST00000122437 469 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm25806-201ENSMUST00000122782 122 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Klra13-ps-201ENSMUST00000125813 802 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm9428-201ENSMUST00000127214 769 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm22361-201ENSMUST00000158435 176 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms