Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trim28Q62318 Gm12328-201ENSMUST00000118611 197 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Gm15206-201ENSMUST00000119143 454 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Gm14554-201ENSMUST00000119548 661 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Gm4914-201ENSMUST00000119757 459 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Gm12704-201ENSMUST00000119789 464 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Gm25271-201ENSMUST00000157273 290 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Gm17091-201ENSMUST00000163248 357 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Mir3473c-201ENSMUST00000175262 81 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC6.37□□□□□ -1.39
Trim28Q62318 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim28Q62318 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim28Q62318 Gm18843-201ENSMUST00000194982 719 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Gm6051-201ENSMUST00000201529 352 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Gm43967-201ENSMUST00000203787 301 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Gm4574-201ENSMUST00000207804 542 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Gm45236-201ENSMUST00000208632 229 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Gm44909-201ENSMUST00000208756 165 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 AC154738.1-201ENSMUST00000227054 368 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trim28Q62318 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trim28Q62318 Olfr881-201ENSMUST00000074611 948 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trim28Q62318 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trim28Q62318 Gm31258-201ENSMUST00000194532 3297 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim28Q62318 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trim28Q62318 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim28Q62318 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim28Q62318 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim28Q62318 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim28Q62318 Gm37833-201ENSMUST00000194342 3256 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Trim28Q62318 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim28Q62318 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.36□□□□□ -1.39
Trim28Q62318 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC6.36□□□□□ -1.39
Trim28Q62318 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim28Q62318 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC6.36□□□□□ -1.39
Trim28Q62318 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim28Q62318 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim28Q62318 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim28Q62318 Gm14930-201ENSMUST00000118864 652 ntBASIC6.36□□□□□ -1.39
Trim28Q62318 Gm12820-201ENSMUST00000119233 342 ntBASIC6.36□□□□□ -1.39
Trim28Q62318 Gm14945-201ENSMUST00000119556 1118 ntBASIC6.36□□□□□ -1.39
Trim28Q62318 Gm14623-201ENSMUST00000121398 603 ntBASIC6.36□□□□□ -1.39
Trim28Q62318 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim28Q62318 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim28Q62318 Gm24190-201ENSMUST00000157976 216 ntBASIC6.36□□□□□ -1.39
Trim28Q62318 Gm23115-201ENSMUST00000158480 108 ntBASIC6.36□□□□□ -1.39
Trim28Q62318 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim28Q62318 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC6.36□□□□□ -1.39
Trim28Q62318 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim28Q62318 Gm2979-201ENSMUST00000193442 463 ntBASIC6.36□□□□□ -1.39
Trim28Q62318 Gm37088-201ENSMUST00000193887 406 ntBASIC6.36□□□□□ -1.39
Trim28Q62318 Gm19096-201ENSMUST00000209705 766 ntBASIC6.36□□□□□ -1.39
Trim28Q62318 AL603630.1-201ENSMUST00000214781 147 ntBASIC6.36□□□□□ -1.39
Trim28Q62318 Gm7045-201ENSMUST00000221466 605 ntBASIC6.36□□□□□ -1.39
Trim28Q62318 AC154552.5-201ENSMUST00000222352 207 ntBASIC6.36□□□□□ -1.39
Trim28Q62318 CT009550.5-201ENSMUST00000226286 382 ntBASIC6.36□□□□□ -1.39
Trim28Q62318 AC098742.1-201ENSMUST00000227945 373 ntBASIC6.36□□□□□ -1.39
Trim28Q62318 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim28Q62318 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim28Q62318 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim28Q62318 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim28Q62318 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim28Q62318 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim28Q62318 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim28Q62318 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim28Q62318 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
Trim28Q62318 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim28Q62318 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim28Q62318 Gm42528-201ENSMUST00000200697 3418 ntBASIC6.35□□□□□ -1.39
Trim28Q62318 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim28Q62318 Gm45415-201ENSMUST00000209644 2074 ntBASIC6.35□□□□□ -1.39
Trim28Q62318 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.35□□□□□ -1.39
Trim28Q62318 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim28Q62318 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Trim28Q62318 Gm9597-202ENSMUST00000227632 1387 ntBASIC6.35□□□□□ -1.39
Trim28Q62318 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Trim28Q62318 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim28Q62318 Gm15185-201ENSMUST00000117397 746 ntBASIC6.35□□□□□ -1.39
Trim28Q62318 Gm13806-201ENSMUST00000117822 325 ntBASIC6.35□□□□□ -1.39
Trim28Q62318 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim28Q62318 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC6.35□□□□□ -1.39
Trim28Q62318 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim28Q62318 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC6.35□□□□□ -1.39
Trim28Q62318 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim28Q62318 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim28Q62318 Gm19206-201ENSMUST00000186401 827 ntBASIC6.35□□□□□ -1.39
Trim28Q62318 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim28Q62318 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC6.35□□□□□ -1.39
Trim28Q62318 Mir1892-201ENSMUST00000197752 80 ntBASIC6.35□□□□□ -1.39
Trim28Q62318 Gm2622-201ENSMUST00000200018 471 ntBASIC6.35□□□□□ -1.39
Trim28Q62318 Gm44757-201ENSMUST00000206373 157 ntBASIC6.35□□□□□ -1.39
Trim28Q62318 Gm44919-201ENSMUST00000208587 1073 ntBASIC6.35□□□□□ -1.39
Trim28Q62318 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim28Q62318 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.35□□□□□ -1.39
Trim28Q62318 AC158523.2-201ENSMUST00000222708 548 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms