Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm13818-201ENSMUST00000119441 511 ntBASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Gm12396-201ENSMUST00000121600 306 ntBASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Gm15141-201ENSMUST00000121860 729 ntBASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Fth-ps2-201ENSMUST00000168364 516 ntBASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Gm24897-201ENSMUST00000179033 107 ntBASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Zfp-ps-201ENSMUST00000185025 478 ntBASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Gm43115-201ENSMUST00000196244 160 ntBASIC10.83□□□□□ -0.68
Trim41Q5NCC3 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 AC162387.1-201ENSMUST00000213369 213 ntBASIC10.83□□□□□ -0.68
Trim41Q5NCC3 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 AC153505.2-201ENSMUST00000217741 277 ntBASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Gm46996-201ENSMUST00000220924 408 ntBASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm37347-201ENSMUST00000193969 3071 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Mir466f-4-201ENSMUST00000116930 121 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm11784-201ENSMUST00000118568 474 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm12936-201ENSMUST00000121439 301 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm18342-201ENSMUST00000186987 694 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm2427-201ENSMUST00000189121 881 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm37272-201ENSMUST00000193401 488 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm19202-201ENSMUST00000198096 808 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm45777-201ENSMUST00000213009 301 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 AL669916.3-201ENSMUST00000213855 94 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 AL669916.6-201ENSMUST00000214610 94 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 AL669916.4-201ENSMUST00000215976 94 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 AL669916.1-201ENSMUST00000217640 94 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm18247-201ENSMUST00000222937 601 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 CT030182.2-201ENSMUST00000223569 620 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 AC154335.1-201ENSMUST00000224744 395 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm23096-201ENSMUST00000083447 107 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm26176-201ENSMUST00000083795 105 ntBASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim41Q5NCC3 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim41Q5NCC3 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim41Q5NCC3 AC135669.2-201ENSMUST00000215636 4958 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Gm22592-201ENSMUST00000104242 131 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Gm13998-201ENSMUST00000120952 335 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Clec2f-201ENSMUST00000121051 374 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Gm15237-201ENSMUST00000122104 469 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Gm22276-201ENSMUST00000122469 129 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Gm23214-201ENSMUST00000122716 157 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Gm45727-201ENSMUST00000212886 572 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trim41Q5NCC3 AC166358.10-201ENSMUST00000220556 144 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Gm6171-201ENSMUST00000220760 645 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Gm10095-201ENSMUST00000222765 483 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 AC124433.2-201ENSMUST00000223867 291 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 AC154257.2-201ENSMUST00000224166 340 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Gm24144-201ENSMUST00000082632 111 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Gm22300-201ENSMUST00000082661 126 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trim41Q5NCC3 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms