Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Gm4012-201ENSMUST00000221504 581 ntBASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.61□□□□□ -1.51
Syne3Q4FZC9 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.61□□□□□ -1.51
Syne3Q4FZC9 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Syne3Q4FZC9 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm38090-201ENSMUST00000195733 1942 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm42614-201ENSMUST00000198724 1554 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm23910-201ENSMUST00000104597 132 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm12245-201ENSMUST00000117266 357 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm14365-201ENSMUST00000117535 587 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm11481-201ENSMUST00000120069 255 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm12639-201ENSMUST00000121400 493 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm15157-201ENSMUST00000121852 702 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm22596-201ENSMUST00000157601 316 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm23022-201ENSMUST00000158768 180 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Mir6411-201ENSMUST00000183556 108 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Mir7087-201ENSMUST00000184840 70 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm28956-201ENSMUST00000189047 427 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm28883-201ENSMUST00000189256 369 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm9057-201ENSMUST00000198791 296 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm45965-201ENSMUST00000221192 1284 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm24150-201ENSMUST00000082759 104 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Syne3Q4FZC9 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm23750-201ENSMUST00000104222 132 ntBASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm11406-201ENSMUST00000117418 484 ntBASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm15126-201ENSMUST00000118631 833 ntBASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm15490-201ENSMUST00000119894 387 ntBASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm12880-201ENSMUST00000120652 494 ntBASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm13533-201ENSMUST00000121104 177 ntBASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm23250-201ENSMUST00000157444 267 ntBASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm26393-201ENSMUST00000157625 129 ntBASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm22519-201ENSMUST00000158270 178 ntBASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm3339-201ENSMUST00000163462 475 ntBASIC5.59□□□□□ -1.51
Syne3Q4FZC9 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms