Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm23959-201ENSMUST00000157208 324 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm26347-201ENSMUST00000157526 131 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm29452-201ENSMUST00000187996 313 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm28860-201ENSMUST00000188103 313 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm8023-201ENSMUST00000195298 903 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm43037-201ENSMUST00000196808 250 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm43084-201ENSMUST00000200696 947 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 AC155923.1-201ENSMUST00000215676 356 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 AC159885.1-201ENSMUST00000222221 199 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Snord59a-201ENSMUST00000082844 74 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm26019-201ENSMUST00000104407 119 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm15786-201ENSMUST00000121079 450 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm15885-201ENSMUST00000122114 388 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm23098-201ENSMUST00000157552 299 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm22154-201ENSMUST00000083844 131 ntBASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Shank3Q4ACU6 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Gm42717-201ENSMUST00000197309 3463 ntBASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Mir292-201ENSMUST00000104847 82 ntBASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Gm9836-201ENSMUST00000117132 216 ntBASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Gm11781-201ENSMUST00000118328 472 ntBASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Gm12335-201ENSMUST00000119738 327 ntBASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Gm11325-201ENSMUST00000119967 469 ntBASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Gm4540-201ENSMUST00000170669 429 ntBASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Spin2g-201ENSMUST00000178425 687 ntBASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Gm27158-201ENSMUST00000183813 238 ntBASIC5.53□□□□□ -1.52
Shank3Q4ACU6 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Gm6261-201ENSMUST00000204707 760 ntBASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Gm17811-201ENSMUST00000206193 387 ntBASIC5.53□□□□□ -1.52
Shank3Q4ACU6 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 AC154481.2-201ENSMUST00000222526 3175 ntBASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Shank3Q4ACU6 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.52
Shank3Q4ACU6 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Shank3Q4ACU6 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Shank3Q4ACU6 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Shank3Q4ACU6 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.52□□□□□ -1.53
Shank3Q4ACU6 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Shank3Q4ACU6 Gm23133-201ENSMUST00000104255 135 ntBASIC5.52□□□□□ -1.53
Shank3Q4ACU6 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.52□□□□□ -1.53
Shank3Q4ACU6 Mir7578-201ENSMUST00000183455 82 ntBASIC5.52□□□□□ -1.53
Shank3Q4ACU6 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC5.52□□□□□ -1.53
Shank3Q4ACU6 Gm17781-201ENSMUST00000195232 649 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms