Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Gm43276-201ENSMUST00000199712 364 ntBASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Gm6051-201ENSMUST00000201529 352 ntBASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Gm44879-201ENSMUST00000207007 503 ntBASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Gm45499-201ENSMUST00000211656 280 ntBASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Gm6988-201ENSMUST00000222676 375 ntBASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm11914-201ENSMUST00000117094 507 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm11633-201ENSMUST00000118176 444 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm15333-201ENSMUST00000118825 364 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm26312-201ENSMUST00000157769 165 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm29356-201ENSMUST00000186935 373 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm18181-201ENSMUST00000190670 736 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm43974-201ENSMUST00000205080 684 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm44757-201ENSMUST00000206373 157 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm17766-201ENSMUST00000209223 442 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm17779-201ENSMUST00000213395 394 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Mir504-201ENSMUST00000093602 79 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.8□□□□□ -1.64
Upf3bQ3ULL6 Gm42671-201ENSMUST00000198013 1604 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Gm12328-201ENSMUST00000118611 197 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Gm13808-201ENSMUST00000121353 184 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Gm26085-201ENSMUST00000157900 116 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Gm5258-201ENSMUST00000165437 327 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Gm2622-201ENSMUST00000200018 471 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Gm44259-201ENSMUST00000204996 298 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 AC154657.1-201ENSMUST00000226394 775 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Upf3bQ3ULL6 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms