Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm14037-201ENSMUST00000120576 313 ntBASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Gm14500-201ENSMUST00000121647 113 ntBASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Gm23855-201ENSMUST00000158377 135 ntBASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Gm26238-201ENSMUST00000175538 117 ntBASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Gm13249-201ENSMUST00000177803 345 ntBASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Gm13144-201ENSMUST00000179385 345 ntBASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Gm45392-201ENSMUST00000210441 214 ntBASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Gm45789-201ENSMUST00000213038 364 ntBASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.85□□□□□ -1.63
Upf3aQ3ULJ3 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm22758-201ENSMUST00000102275 96 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm25290-201ENSMUST00000122796 144 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm23743-201ENSMUST00000157389 274 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm25264-201ENSMUST00000158519 117 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm27468-201ENSMUST00000183577 106 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm21139-201ENSMUST00000186594 877 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm18183-201ENSMUST00000191024 615 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm29793-201ENSMUST00000202874 460 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm44038-201ENSMUST00000203952 889 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm3189-201ENSMUST00000205595 832 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm45434-201ENSMUST00000210550 293 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Gm19134-201ENSMUST00000221203 487 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 AC114573.1-201ENSMUST00000224120 1210 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 AC140209.1-204ENSMUST00000226736 739 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Upf3aQ3ULJ3 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.84□□□□□ -1.64
Upf3aQ3ULJ3 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Upf3aQ3ULJ3 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
Upf3aQ3ULJ3 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Upf3aQ3ULJ3 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Upf3aQ3ULJ3 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.84□□□□□ -1.64
Upf3aQ3ULJ3 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Gm13771-201ENSMUST00000117988 238 ntBASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 n-R5s30-201ENSMUST00000122624 122 ntBASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Gm29356-201ENSMUST00000186935 373 ntBASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Gm5284-201ENSMUST00000199053 903 ntBASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Gm42983-201ENSMUST00000199879 815 ntBASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Gm18011-201ENSMUST00000203717 565 ntBASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC4.83□□□□□ -1.64
Upf3aQ3ULJ3 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms