Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm11507-201ENSMUST00000156462 412 ntBASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm25342-201ENSMUST00000157459 122 ntBASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm18828-202ENSMUST00000181035 310 ntBASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm8641-201ENSMUST00000186995 826 ntBASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm9442-201ENSMUST00000194242 319 ntBASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm33973-201ENSMUST00000195148 534 ntBASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm18585-201ENSMUST00000215197 556 ntBASIC4.72□□□□□ -1.65
Brf2Q3UAW9 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.72□□□□□ -1.65
Brf2Q3UAW9 AC154257.2-201ENSMUST00000224166 340 ntBASIC4.72□□□□□ -1.65
Brf2Q3UAW9 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 AC134335.1-201ENSMUST00000227626 329 ntBASIC4.72□□□□□ -1.65
Brf2Q3UAW9 AC166574.7-201ENSMUST00000228502 704 ntBASIC4.72□□□□□ -1.65
Brf2Q3UAW9 CT009600.1-201ENSMUST00000228771 337 ntBASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm9386-201ENSMUST00000095195 381 ntBASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm42967-201ENSMUST00000198647 2312 ntBASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.72□□□□□ -1.65
Brf2Q3UAW9 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.71□□□□□ -1.65
Brf2Q3UAW9 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 AC153881.3-201ENSMUST00000218494 1561 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Gm15159-201ENSMUST00000117062 764 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Gm15357-201ENSMUST00000119160 285 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Gm12327-201ENSMUST00000121729 1168 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Gm24444-201ENSMUST00000157244 308 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Gm6717-201ENSMUST00000185549 838 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Gm18952-201ENSMUST00000194471 846 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 AC112956.1-201ENSMUST00000213563 492 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 AC153840.1-201ENSMUST00000219685 313 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 AC131743.3-201ENSMUST00000222099 662 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Gm4963-201ENSMUST00000072718 378 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Mir325-201ENSMUST00000083491 98 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
Brf2Q3UAW9 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Brf2Q3UAW9 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Brf2Q3UAW9 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Brf2Q3UAW9 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.7□□□□□ -1.66
Brf2Q3UAW9 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Brf2Q3UAW9 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Brf2Q3UAW9 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Brf2Q3UAW9 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.7□□□□□ -1.66
Brf2Q3UAW9 Gm15382-201ENSMUST00000118011 537 ntBASIC4.7□□□□□ -1.66
Brf2Q3UAW9 Gm12889-201ENSMUST00000118684 241 ntBASIC4.7□□□□□ -1.66
Brf2Q3UAW9 Gm13488-201ENSMUST00000120419 179 ntBASIC4.7□□□□□ -1.66
Brf2Q3UAW9 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.7□□□□□ -1.66
Brf2Q3UAW9 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Brf2Q3UAW9 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Brf2Q3UAW9 Gm23387-201ENSMUST00000158586 107 ntBASIC4.7□□□□□ -1.66
Brf2Q3UAW9 Gm10319-202ENSMUST00000159439 846 ntBASIC4.7□□□□□ -1.66
Brf2Q3UAW9 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC4.7□□□□□ -1.66
Brf2Q3UAW9 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms