Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ebf1Q07802 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.81□□□□□ -1.48
Ebf1Q07802 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ebf1Q07802 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.81□□□□□ -1.48
Ebf1Q07802 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ebf1Q07802 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ebf1Q07802 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ebf1Q07802 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ebf1Q07802 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.8□□□□□ -1.48
Ebf1Q07802 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm23750-201ENSMUST00000104222 132 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm16400-201ENSMUST00000116523 1029 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Mir1188-201ENSMUST00000116756 120 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm15312-201ENSMUST00000118827 271 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm4234-201ENSMUST00000119747 714 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm11522-201ENSMUST00000120533 176 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm15044-201ENSMUST00000120703 598 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm15152-201ENSMUST00000121540 394 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm15309-201ENSMUST00000121644 240 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm14766-201ENSMUST00000121689 367 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Ebf1Q07802 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm11197-201ENSMUST00000145158 839 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm22491-201ENSMUST00000157190 102 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm24939-201ENSMUST00000158325 137 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm25603-201ENSMUST00000158361 105 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm18604-201ENSMUST00000172535 558 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Mup-ps7-201ENSMUST00000178292 545 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Mup-ps8-201ENSMUST00000178663 545 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Mup-ps9-201ENSMUST00000178847 545 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Mup-ps6-201ENSMUST00000179564 545 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm29634-201ENSMUST00000188467 696 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm28699-201ENSMUST00000189193 696 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm42522-201ENSMUST00000196071 255 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm18007-201ENSMUST00000205019 844 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.8□□□□□ -1.48
Ebf1Q07802 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.8□□□□□ -1.48
Ebf1Q07802 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.8□□□□□ -1.48
Ebf1Q07802 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ebf1Q07802 AC131720.2-201ENSMUST00000220420 431 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC5.8□□□□□ -1.48
Ebf1Q07802 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm10064-201ENSMUST00000071235 399 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ebf1Q07802 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm23846-201ENSMUST00000083835 107 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm21286-201ENSMUST00000098035 545 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ebf1Q07802 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ebf1Q07802 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ebf1Q07802 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ebf1Q07802 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ebf1Q07802 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ebf1Q07802 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.8□□□□□ -1.48
Ebf1Q07802 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ebf1Q07802 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.8□□□□□ -1.48
Ebf1Q07802 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.79□□□□□ -1.48
Ebf1Q07802 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ebf1Q07802 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ebf1Q07802 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ebf1Q07802 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.79□□□□□ -1.48
Ebf1Q07802 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.79□□□□□ -1.48
Ebf1Q07802 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Ebf1Q07802 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ebf1Q07802 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.79□□□□□ -1.48
Ebf1Q07802 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ebf1Q07802 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ebf1Q07802 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ebf1Q07802 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Ebf1Q07802 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Ebf1Q07802 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ebf1Q07802 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.79□□□□□ -1.48
Ebf1Q07802 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ebf1Q07802 Gm11798-201ENSMUST00000119150 421 ntBASIC5.79□□□□□ -1.48
Ebf1Q07802 Gm13603-201ENSMUST00000119404 83 ntBASIC5.79□□□□□ -1.48
Ebf1Q07802 Gm12808-201ENSMUST00000120597 404 ntBASIC5.79□□□□□ -1.48
Ebf1Q07802 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.79□□□□□ -1.48
Ebf1Q07802 Gm13007-201ENSMUST00000121866 365 ntBASIC5.79□□□□□ -1.48
Ebf1Q07802 Gm11254-201ENSMUST00000122368 653 ntBASIC5.79□□□□□ -1.48
Ebf1Q07802 Gm13738-201ENSMUST00000122437 469 ntBASIC5.79□□□□□ -1.48
Ebf1Q07802 Gm16259-201ENSMUST00000145241 553 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 118.9 ms