Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm20561-201ENSMUST00000188131 292 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm28474-201ENSMUST00000188501 315 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm28066-201ENSMUST00000188657 472 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm18969-201ENSMUST00000189423 730 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm28788-201ENSMUST00000189717 375 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm29558-201ENSMUST00000190134 375 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm28404-201ENSMUST00000190242 453 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm36986-201ENSMUST00000195320 353 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm43554-201ENSMUST00000199987 186 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm42961-201ENSMUST00000202023 181 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm17987-201ENSMUST00000206902 603 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm6702-201ENSMUST00000208496 471 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm17994-201ENSMUST00000209260 533 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm45312-201ENSMUST00000210566 311 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.07□□□□□ -1.6
Col8a1Q00780 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm46994-201ENSMUST00000221523 219 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC5.07□□□□□ -1.6
Col8a1Q00780 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col8a1Q00780 AC155314.1-201ENSMUST00000227624 508 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 AC144798.1-201ENSMUST00000228120 391 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm28392-201ENSMUST00000077630 393 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm23737-201ENSMUST00000082547 159 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm23975-201ENSMUST00000082685 106 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm24460-201ENSMUST00000082731 106 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm23502-201ENSMUST00000083902 145 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Col8a1Q00780 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col8a1Q00780 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
Col8a1Q00780 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col8a1Q00780 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col8a1Q00780 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col8a1Q00780 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col8a1Q00780 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col8a1Q00780 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col8a1Q00780 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col8a1Q00780 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col8a1Q00780 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col8a1Q00780 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col8a1Q00780 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col8a1Q00780 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm23750-201ENSMUST00000104222 132 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm12077-201ENSMUST00000117049 364 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm15087-201ENSMUST00000117465 1172 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm14885-201ENSMUST00000117969 496 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm13604-201ENSMUST00000119332 482 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm14238-201ENSMUST00000120227 323 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm15142-201ENSMUST00000121013 856 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm11321-201ENSMUST00000121257 902 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm14638-201ENSMUST00000121338 216 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm22492-201ENSMUST00000157192 297 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm23542-201ENSMUST00000158208 96 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm24940-201ENSMUST00000158326 108 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm20453-201ENSMUST00000173968 226 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm24465-201ENSMUST00000178398 107 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm21399-201ENSMUST00000180210 597 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm27004-201ENSMUST00000183300 727 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Mir7056-201ENSMUST00000183776 59 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm9320-201ENSMUST00000184151 473 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm28412-201ENSMUST00000187243 177 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm18327-201ENSMUST00000202426 830 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm45596-201ENSMUST00000209279 434 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm5649-201ENSMUST00000217918 951 ntBASIC5.06□□□□□ -1.6
Col8a1Q00780 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col8a1Q00780 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.06□□□□□ -1.6
Col8a1Q00780 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.06□□□□□ -1.6
Col8a1Q00780 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.06□□□□□ -1.6
Col8a1Q00780 AC154600.1-201ENSMUST00000226480 714 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms