Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC2.98□□□□□ -1.93
PrkdcP97313 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PrkdcP97313 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Gm12820-201ENSMUST00000119233 342 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Gm12900-201ENSMUST00000120919 573 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Gm15986-201ENSMUST00000122153 400 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC2.98□□□□□ -1.93
PrkdcP97313 Gm23365-201ENSMUST00000175019 125 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Gm25960-201ENSMUST00000175110 125 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Gm44453-201ENSMUST00000175161 126 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Gm25195-201ENSMUST00000177656 126 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC2.98□□□□□ -1.93
PrkdcP97313 Mirlet7e-201ENSMUST00000196737 93 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PrkdcP97313 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PrkdcP97313 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PrkdcP97313 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PrkdcP97313 Gm37569-201ENSMUST00000192111 1722 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PrkdcP97313 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Gm5155-201ENSMUST00000072381 2841 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PrkdcP97313 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Gm12719-201ENSMUST00000118859 241 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Gm12103-201ENSMUST00000121892 362 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Gm16125-201ENSMUST00000159003 339 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC2.98□□□□□ -1.93
PrkdcP97313 Gm18426-201ENSMUST00000191874 973 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Trbv28-201ENSMUST00000192804 264 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC2.98□□□□□ -1.93
PrkdcP97313 AC130547.1-201ENSMUST00000228079 1047 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PrkdcP97313 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
PrkdcP97313 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
PrkdcP97313 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PrkdcP97313 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 AC101945.4-201ENSMUST00000228464 1976 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PrkdcP97313 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PrkdcP97313 Gm43025-201ENSMUST00000201764 1886 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
PrkdcP97313 Gm24477-201ENSMUST00000157438 103 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Gm27899-201ENSMUST00000184715 64 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Gm28941-201ENSMUST00000185536 1017 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Gm33973-201ENSMUST00000195148 534 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Gm18429-201ENSMUST00000198707 421 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Gm44513-201ENSMUST00000206811 439 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
PrkdcP97313 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PrkdcP97313 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
PrkdcP97313 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC2.97□□□□□ -1.93
PrkdcP97313 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
PrkdcP97313 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PrkdcP97313 Gm37332-201ENSMUST00000195853 2844 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PrkdcP97313 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PrkdcP97313 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PrkdcP97313 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC2.97□□□□□ -1.93
PrkdcP97313 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC2.97□□□□□ -1.93
PrkdcP97313 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PrkdcP97313 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PrkdcP97313 Gm5715-201ENSMUST00000196854 1465 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PrkdcP97313 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC2.97□□□□□ -1.93
PrkdcP97313 Gm6214-201ENSMUST00000178845 541 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PrkdcP97313 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PrkdcP97313 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PrkdcP97313 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PrkdcP97313 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
PrkdcP97313 Gm43428-201ENSMUST00000200108 3845 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 AC112274.1-201ENSMUST00000218957 4274 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Gm15902-202ENSMUST00000219623 3477 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Gm9911-201ENSMUST00000211467 2802 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 AC122024.1-201ENSMUST00000219276 4850 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PrkdcP97313 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC2.97□□□□□ -1.93
PrkdcP97313 Gm38152-201ENSMUST00000195389 3566 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Gm15268-201ENSMUST00000118845 352 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Gm23084-201ENSMUST00000157850 114 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC2.97□□□□□ -1.93
PrkdcP97313 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC2.97□□□□□ -1.93
PrkdcP97313 Gm42458-201ENSMUST00000201914 369 ntBASIC2.97□□□□□ -1.93
PrkdcP97313 AC154738.1-201ENSMUST00000227054 368 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms