Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm13195-201ENSMUST00000117229 261 ntBASIC5.23□□□□□ -1.57
CiitaP79621 Gm9432-201ENSMUST00000117810 759 ntBASIC5.23□□□□□ -1.57
CiitaP79621 Gm14909-201ENSMUST00000117853 351 ntBASIC5.23□□□□□ -1.57
CiitaP79621 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC5.23□□□□□ -1.57
CiitaP79621 Gm13132-201ENSMUST00000121194 472 ntBASIC5.23□□□□□ -1.57
CiitaP79621 Gm22084-201ENSMUST00000157585 105 ntBASIC5.23□□□□□ -1.57
CiitaP79621 Gm16589-201ENSMUST00000159522 918 ntBASIC5.23□□□□□ -1.57
CiitaP79621 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC5.23□□□□□ -1.57
CiitaP79621 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CiitaP79621 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CiitaP79621 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CiitaP79621 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CiitaP79621 Gm19200-201ENSMUST00000182579 1001 ntBASIC5.23□□□□□ -1.57
CiitaP79621 Gm4412-201ENSMUST00000186660 433 ntBASIC5.23□□□□□ -1.57
CiitaP79621 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CiitaP79621 Gm29525-201ENSMUST00000189844 699 ntBASIC5.23□□□□□ -1.57
CiitaP79621 Gm29523-201ENSMUST00000191415 699 ntBASIC5.23□□□□□ -1.57
CiitaP79621 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.23□□□□□ -1.57
CiitaP79621 Gm3148-201ENSMUST00000203594 612 ntBASIC5.23□□□□□ -1.57
CiitaP79621 Gm18791-201ENSMUST00000204611 726 ntBASIC5.23□□□□□ -1.57
CiitaP79621 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC5.23□□□□□ -1.57
CiitaP79621 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CiitaP79621 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.23□□□□□ -1.57
CiitaP79621 Gm20586-201ENSMUST00000210122 547 ntBASIC5.23□□□□□ -1.57
CiitaP79621 AC153522.1-201ENSMUST00000220047 1090 ntBASIC5.23□□□□□ -1.57
CiitaP79621 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CiitaP79621 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CiitaP79621 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CiitaP79621 Snord59a-201ENSMUST00000082844 74 ntBASIC5.23□□□□□ -1.57
CiitaP79621 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CiitaP79621 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CiitaP79621 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CiitaP79621 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CiitaP79621 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CiitaP79621 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CiitaP79621 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CiitaP79621 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CiitaP79621 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CiitaP79621 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
CiitaP79621 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CiitaP79621 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CiitaP79621 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CiitaP79621 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CiitaP79621 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CiitaP79621 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CiitaP79621 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CiitaP79621 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.22□□□□□ -1.57
CiitaP79621 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CiitaP79621 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CiitaP79621 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CiitaP79621 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
CiitaP79621 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CiitaP79621 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CiitaP79621 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CiitaP79621 Gm23942-201ENSMUST00000101956 107 ntBASIC5.22□□□□□ -1.57
CiitaP79621 Gm13508-201ENSMUST00000121639 775 ntBASIC5.22□□□□□ -1.57
CiitaP79621 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.22□□□□□ -1.57
CiitaP79621 Gm9294-201ENSMUST00000165198 789 ntBASIC5.22□□□□□ -1.57
CiitaP79621 Gm5558-201ENSMUST00000178933 495 ntBASIC5.22□□□□□ -1.57
CiitaP79621 Gm27387-201ENSMUST00000184583 116 ntBASIC5.22□□□□□ -1.57
CiitaP79621 Gm29086-201ENSMUST00000186774 222 ntBASIC5.22□□□□□ -1.57
CiitaP79621 Gm29085-201ENSMUST00000187108 225 ntBASIC5.22□□□□□ -1.57
CiitaP79621 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CiitaP79621 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.22□□□□□ -1.57
CiitaP79621 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5.22□□□□□ -1.57
CiitaP79621 Gm18011-201ENSMUST00000203717 565 ntBASIC5.22□□□□□ -1.57
CiitaP79621 Gm44138-201ENSMUST00000204939 271 ntBASIC5.22□□□□□ -1.57
CiitaP79621 Gm45690-201ENSMUST00000210775 246 ntBASIC5.22□□□□□ -1.57
CiitaP79621 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.22□□□□□ -1.57
CiitaP79621 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.22□□□□□ -1.57
CiitaP79621 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CiitaP79621 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CiitaP79621 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CiitaP79621 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.22□□□□□ -1.57
CiitaP79621 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CiitaP79621 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CiitaP79621 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.22□□□□□ -1.57
CiitaP79621 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CiitaP79621 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.22□□□□□ -1.57
CiitaP79621 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CiitaP79621 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CiitaP79621 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CiitaP79621 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC5.22□□□□□ -1.57
CiitaP79621 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CiitaP79621 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CiitaP79621 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC5.21□□□□□ -1.57
CiitaP79621 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
CiitaP79621 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CiitaP79621 Gm12237-201ENSMUST00000120158 470 ntBASIC5.21□□□□□ -1.58
CiitaP79621 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CiitaP79621 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CiitaP79621 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC5.21□□□□□ -1.58
CiitaP79621 Gm24113-201ENSMUST00000157477 276 ntBASIC5.21□□□□□ -1.58
CiitaP79621 Gm24690-201ENSMUST00000157759 97 ntBASIC5.21□□□□□ -1.58
CiitaP79621 Gm22312-201ENSMUST00000158005 130 ntBASIC5.21□□□□□ -1.58
CiitaP79621 Gm26487-201ENSMUST00000158022 94 ntBASIC5.21□□□□□ -1.58
CiitaP79621 Gm22326-201ENSMUST00000158897 351 ntBASIC5.21□□□□□ -1.58
CiitaP79621 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CiitaP79621 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CiitaP79621 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms