Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.12□□□□□ -1.59
NcanP55066 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.12□□□□□ -1.59
NcanP55066 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NcanP55066 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
NcanP55066 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
NcanP55066 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NcanP55066 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NcanP55066 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NcanP55066 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NcanP55066 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NcanP55066 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NcanP55066 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NcanP55066 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NcanP55066 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.11□□□□□ -1.59
NcanP55066 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
NcanP55066 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.11□□□□□ -1.59
NcanP55066 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.11□□□□□ -1.59
NcanP55066 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NcanP55066 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NcanP55066 Gm12731-201ENSMUST00000120932 268 ntBASIC5.11□□□□□ -1.59
NcanP55066 Gm11200-201ENSMUST00000121698 448 ntBASIC5.11□□□□□ -1.59
NcanP55066 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.11□□□□□ -1.59
NcanP55066 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.11□□□□□ -1.59
NcanP55066 Gm23633-201ENSMUST00000175293 119 ntBASIC5.11□□□□□ -1.59
NcanP55066 Mir6374-201ENSMUST00000184003 107 ntBASIC5.11□□□□□ -1.59
NcanP55066 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC5.11□□□□□ -1.59
NcanP55066 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NcanP55066 Gm18445-201ENSMUST00000195502 774 ntBASIC5.11□□□□□ -1.59
NcanP55066 Gm4734-201ENSMUST00000200117 777 ntBASIC5.11□□□□□ -1.59
NcanP55066 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NcanP55066 Gm45078-201ENSMUST00000205343 546 ntBASIC5.11□□□□□ -1.59
NcanP55066 Gm45845-201ENSMUST00000207326 582 ntBASIC5.11□□□□□ -1.59
NcanP55066 Gm44849-201ENSMUST00000207595 484 ntBASIC5.11□□□□□ -1.59
NcanP55066 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC5.11□□□□□ -1.59
NcanP55066 Gm18258-201ENSMUST00000210413 542 ntBASIC5.11□□□□□ -1.59
NcanP55066 Gm20946-201ENSMUST00000212367 461 ntBASIC5.11□□□□□ -1.59
NcanP55066 AC156504.1-201ENSMUST00000214608 157 ntBASIC5.11□□□□□ -1.59
NcanP55066 AC122924.1-201ENSMUST00000222044 163 ntBASIC5.11□□□□□ -1.59
NcanP55066 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NcanP55066 Gm22971-201ENSMUST00000083305 97 ntBASIC5.11□□□□□ -1.59
NcanP55066 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NcanP55066 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NcanP55066 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NcanP55066 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NcanP55066 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.11□□□□□ -1.59
NcanP55066 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NcanP55066 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NcanP55066 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NcanP55066 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
NcanP55066 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NcanP55066 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
NcanP55066 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NcanP55066 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NcanP55066 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NcanP55066 Gm37802-201ENSMUST00000194998 2643 ntBASIC5.1□□□□□ -1.59
NcanP55066 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NcanP55066 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NcanP55066 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NcanP55066 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NcanP55066 Gm5133-201ENSMUST00000118940 1255 ntBASIC5.1□□□□□ -1.59
NcanP55066 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.1□□□□□ -1.59
NcanP55066 Gm11829-201ENSMUST00000121003 282 ntBASIC5.1□□□□□ -1.59
NcanP55066 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.1□□□□□ -1.59
NcanP55066 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NcanP55066 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.1□□□□□ -1.59
NcanP55066 Gm26350-201ENSMUST00000157531 288 ntBASIC5.1□□□□□ -1.59
NcanP55066 Gm24739-201ENSMUST00000158855 292 ntBASIC5.1□□□□□ -1.59
NcanP55066 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NcanP55066 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NcanP55066 Gm21638-201ENSMUST00000179473 836 ntBASIC5.1□□□□□ -1.59
NcanP55066 Gm6802-202ENSMUST00000186566 126 ntBASIC5.1□□□□□ -1.59
NcanP55066 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NcanP55066 Gm18698-201ENSMUST00000192327 668 ntBASIC5.1□□□□□ -1.59
NcanP55066 Gm43304-201ENSMUST00000196803 326 ntBASIC5.1□□□□□ -1.59
NcanP55066 Gm29793-201ENSMUST00000202874 460 ntBASIC5.1□□□□□ -1.59
NcanP55066 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NcanP55066 Gm17780-201ENSMUST00000207142 612 ntBASIC5.1□□□□□ -1.59
NcanP55066 Gm5338-201ENSMUST00000209530 639 ntBASIC5.1□□□□□ -1.59
NcanP55066 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC5.1□□□□□ -1.59
NcanP55066 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC5.1□□□□□ -1.59
NcanP55066 AC155923.1-201ENSMUST00000215676 356 ntBASIC5.1□□□□□ -1.59
NcanP55066 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
NcanP55066 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC5.1□□□□□ -1.59
NcanP55066 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.1□□□□□ -1.59
NcanP55066 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.1□□□□□ -1.59
NcanP55066 CT030194.2-201ENSMUST00000225752 379 ntBASIC5.1□□□□□ -1.59
NcanP55066 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.1□□□□□ -1.59
NcanP55066 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NcanP55066 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NcanP55066 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NcanP55066 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NcanP55066 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC5.1□□□□□ -1.59
NcanP55066 Gm4987-201ENSMUST00000078326 408 ntBASIC5.1□□□□□ -1.59
NcanP55066 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NcanP55066 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
NcanP55066 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NcanP55066 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NcanP55066 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NcanP55066 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.09□□□□□ -1.59
NcanP55066 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms