Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.17□□□□□ -1.42
Sox1P53783 AC144628.2-201ENSMUST00000227374 352 ntBASIC6.17□□□□□ -1.42
Sox1P53783 AC154467.1-201ENSMUST00000227527 449 ntBASIC6.17□□□□□ -1.42
Sox1P53783 AC163646.2-201ENSMUST00000227962 141 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sox1P53783 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 n-R5s27-201ENSMUST00000093699 119 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sox1P53783 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Sox1P53783 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox1P53783 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.16□□□□□ -1.42
Sox1P53783 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sox1P53783 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sox1P53783 Gm43181-201ENSMUST00000197001 2072 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sox1P53783 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.16□□□□□ -1.42
Sox1P53783 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sox1P53783 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox1P53783 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sox1P53783 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sox1P53783 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC6.16□□□□□ -1.42
Sox1P53783 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox1P53783 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sox1P53783 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.16□□□□□ -1.42
Sox1P53783 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Sox1P53783 Gm26156-201ENSMUST00000116999 123 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm14995-201ENSMUST00000117135 391 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm14575-201ENSMUST00000117210 560 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm15399-201ENSMUST00000118055 724 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm14082-201ENSMUST00000118582 801 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm12891-201ENSMUST00000119358 240 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm7855-201ENSMUST00000137737 687 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox1P53783 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox1P53783 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC6.16□□□□□ -1.42
Sox1P53783 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox1P53783 Gm25224-201ENSMUST00000158195 68 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Ear-ps9-201ENSMUST00000161963 460 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC6.16□□□□□ -1.42
Sox1P53783 Gm3242-201ENSMUST00000171273 485 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm20519-201ENSMUST00000173684 359 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox1P53783 Gm21959-201ENSMUST00000178439 452 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox1P53783 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox1P53783 Gm27855-201ENSMUST00000184122 128 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.16□□□□□ -1.42
Sox1P53783 Gm43559-201ENSMUST00000198755 466 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm43026-201ENSMUST00000202972 325 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm45063-201ENSMUST00000203726 472 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm34224-201ENSMUST00000204606 364 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC6.16□□□□□ -1.42
Sox1P53783 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.16□□□□□ -1.42
Sox1P53783 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC6.16□□□□□ -1.42
Sox1P53783 Gm2614-201ENSMUST00000223227 403 ntBASIC6.16□□□□□ -1.42
Sox1P53783 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.16□□□□□ -1.42
Sox1P53783 CT025548.1-201ENSMUST00000227459 257 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sox1P53783 Gm22300-201ENSMUST00000082661 126 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sox1P53783 Gm9386-201ENSMUST00000095195 381 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox1P53783 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Sox1P53783 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox1P53783 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.16□□□□□ -1.42
Sox1P53783 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox1P53783 Gm6215-201ENSMUST00000119297 1386 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm7905-201ENSMUST00000119933 1386 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm6207-201ENSMUST00000120075 1386 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm6228-201ENSMUST00000178856 1386 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm6221-201ENSMUST00000180064 1386 ntBASIC6.16□□□□□ -1.42
Sox1P53783 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sox1P53783 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox1P53783 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox1P53783 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox1P53783 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sox1P53783 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.16□□□□□ -1.42
Sox1P53783 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox1P53783 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Sox1P53783 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox1P53783 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Sox1P53783 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox1P53783 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms