Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx1P48377 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx1P48377 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
Rfx1P48377 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx1P48377 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Rfx1P48377 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx1P48377 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx1P48377 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx1P48377 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Rfx1P48377 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Rfx1P48377 Gm16016-201ENSMUST00000120831 550 ntBASIC6.85□□□□□ -1.31
Rfx1P48377 Gm12369-201ENSMUST00000121343 942 ntBASIC6.85□□□□□ -1.31
Rfx1P48377 Gm12755-201ENSMUST00000122297 282 ntBASIC6.85□□□□□ -1.31
Rfx1P48377 Mup-ps12-201ENSMUST00000126217 549 ntBASIC6.85□□□□□ -1.31
Rfx1P48377 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx1P48377 Gm25559-201ENSMUST00000157182 74 ntBASIC6.85□□□□□ -1.31
Rfx1P48377 Scarna10-201ENSMUST00000158992 325 ntBASIC6.85□□□□□ -1.31
Rfx1P48377 Gm22642-201ENSMUST00000175352 252 ntBASIC6.85□□□□□ -1.31
Rfx1P48377 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC6.85□□□□□ -1.31
Rfx1P48377 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx1P48377 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 Gm28779-201ENSMUST00000189678 323 ntBASIC6.85□□□□□ -1.31
Rfx1P48377 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx1P48377 Gm44382-201ENSMUST00000198683 122 ntBASIC6.85□□□□□ -1.31
Rfx1P48377 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.85□□□□□ -1.31
Rfx1P48377 Gm7181-201ENSMUST00000202197 434 ntBASIC6.85□□□□□ -1.31
Rfx1P48377 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.85□□□□□ -1.31
Rfx1P48377 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 Gm7570-201ENSMUST00000215246 698 ntBASIC6.85□□□□□ -1.31
Rfx1P48377 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx1P48377 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Rfx1P48377 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.85□□□□□ -1.31
Rfx1P48377 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx1P48377 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Rfx1P48377 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.85□□□□□ -1.31
Rfx1P48377 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx1P48377 Gm43826-201ENSMUST00000199604 2612 ntBASIC6.85□□□□□ -1.31
Rfx1P48377 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.85□□□□□ -1.31
Rfx1P48377 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx1P48377 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx1P48377 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.85□□□□□ -1.31
Rfx1P48377 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx1P48377 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx1P48377 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Rfx1P48377 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Rfx1P48377 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx1P48377 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Rfx1P48377 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx1P48377 Gm8675-201ENSMUST00000201408 1856 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Rfx1P48377 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Rfx1P48377 Gm11271-201ENSMUST00000116054 440 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm7429-201ENSMUST00000118664 348 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm14863-201ENSMUST00000119648 307 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm5384-201ENSMUST00000120313 463 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm7916-201ENSMUST00000120325 456 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm14732-201ENSMUST00000121372 545 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm13363-201ENSMUST00000122008 522 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm15164-201ENSMUST00000122203 271 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC6.84□□□□□ -1.31
Rfx1P48377 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.84□□□□□ -1.31
Rfx1P48377 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx1P48377 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Rfx1P48377 Gm3084-201ENSMUST00000169967 598 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm5709-201ENSMUST00000177879 1165 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Rfx1P48377 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
Rfx1P48377 Gm5527-201ENSMUST00000179821 642 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm21399-201ENSMUST00000180210 597 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm6501-201ENSMUST00000187178 916 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC6.84□□□□□ -1.31
Rfx1P48377 Gm2053-201ENSMUST00000195671 631 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.84□□□□□ -1.31
Rfx1P48377 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.84□□□□□ -1.31
Rfx1P48377 AC161456.1-201ENSMUST00000206771 887 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx1P48377 Gm4032-201ENSMUST00000210886 487 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm8523-201ENSMUST00000211386 552 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms