Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx2P43241 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Cdx2P43241 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx2P43241 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx2P43241 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.35□□□□□ -1.71
Cdx2P43241 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx2P43241 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
Cdx2P43241 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx2P43241 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Cdx2P43241 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Cdx2P43241 Gm13484-201ENSMUST00000120738 412 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC4.35□□□□□ -1.71
Cdx2P43241 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx2P43241 Gm25386-201ENSMUST00000157814 288 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Gm16566-201ENSMUST00000160387 910 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Cdx2P43241 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Cdx2P43241 Gm4557-201ENSMUST00000185826 907 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Gm4526-201ENSMUST00000186039 920 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Gm8708-201ENSMUST00000188500 906 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Gm7449-201ENSMUST00000194393 663 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx2P43241 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.35□□□□□ -1.71
Cdx2P43241 AC110816.1-201ENSMUST00000218559 980 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Gm46190-201ENSMUST00000219650 427 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Gm9616-201ENSMUST00000221154 781 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Gm19134-201ENSMUST00000221203 487 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Gm8288-201ENSMUST00000223406 593 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.35□□□□□ -1.71
Cdx2P43241 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Cdx2P43241 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Cdx2P43241 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Cdx2P43241 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx2P43241 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx2P43241 CT009734.1-201ENSMUST00000227657 1687 ntBASIC4.35□□□□□ -1.71
Cdx2P43241 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Cdx2P43241 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx2P43241 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Cdx2P43241 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Cdx2P43241 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Cdx2P43241 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Cdx2P43241 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.34□□□□□ -1.71
Cdx2P43241 Gm13195-201ENSMUST00000117229 261 ntBASIC4.34□□□□□ -1.71
Cdx2P43241 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.34□□□□□ -1.71
Cdx2P43241 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Cdx2P43241 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.34□□□□□ -1.71
Cdx2P43241 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Cdx2P43241 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Cdx2P43241 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Cdx2P43241 Trbv11-201ENSMUST00000194354 260 ntBASIC4.34□□□□□ -1.71
Cdx2P43241 Gm20239-201ENSMUST00000196610 982 ntBASIC4.34□□□□□ -1.71
Cdx2P43241 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Cdx2P43241 Gm42666-201ENSMUST00000201954 152 ntBASIC4.34□□□□□ -1.71
Cdx2P43241 Gm44054-201ENSMUST00000203814 372 ntBASIC4.34□□□□□ -1.71
Cdx2P43241 Gm4045-201ENSMUST00000204076 310 ntBASIC4.34□□□□□ -1.71
Cdx2P43241 Gm44277-201ENSMUST00000205128 649 ntBASIC4.34□□□□□ -1.71
Cdx2P43241 Gm45523-201ENSMUST00000210712 799 ntBASIC4.34□□□□□ -1.71
Cdx2P43241 Gm18320-201ENSMUST00000211304 595 ntBASIC4.34□□□□□ -1.71
Cdx2P43241 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.34□□□□□ -1.71
Cdx2P43241 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.34□□□□□ -1.71
Cdx2P43241 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.34□□□□□ -1.71
Cdx2P43241 AC122357.2-201ENSMUST00000220732 1525 ntBASIC4.34□□□□□ -1.71
Cdx2P43241 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Cdx2P43241 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Cdx2P43241 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Cdx2P43241 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Cdx2P43241 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Cdx2P43241 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
Cdx2P43241 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx2P43241 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx2P43241 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx2P43241 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Gm45885-202ENSMUST00000211520 1383 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Gm15394-201ENSMUST00000119656 1308 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx2P43241 Gm22269-201ENSMUST00000104002 130 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Gm11781-201ENSMUST00000118328 472 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Gm11625-201ENSMUST00000119535 296 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Gm12704-201ENSMUST00000119789 464 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Gm13973-201ENSMUST00000121371 894 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx2P43241 Mir5710-201ENSMUST00000176884 69 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Gm20673-201ENSMUST00000177167 430 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Cdx2P43241 Gm18350-201ENSMUST00000187395 955 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 Gm30280-201ENSMUST00000192214 262 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.33□□□□□ -1.72
Cdx2P43241 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx2P43241 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx2P43241 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms