Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm32453-201ENSMUST00000204183 456 ntBASIC3.75□□□□□ -1.81
Sdc1P18828 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Sdc1P18828 Gm44773-201ENSMUST00000207374 557 ntBASIC3.75□□□□□ -1.81
Sdc1P18828 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Sdc1P18828 Gm44648-201ENSMUST00000208267 329 ntBASIC3.75□□□□□ -1.81
Sdc1P18828 Gm45236-201ENSMUST00000208632 229 ntBASIC3.75□□□□□ -1.81
Sdc1P18828 Gm44543-201ENSMUST00000209136 396 ntBASIC3.75□□□□□ -1.81
Sdc1P18828 Gm45734-201ENSMUST00000211916 411 ntBASIC3.75□□□□□ -1.81
Sdc1P18828 Gm46191-201ENSMUST00000218899 433 ntBASIC3.75□□□□□ -1.81
Sdc1P18828 Gm18387-201ENSMUST00000220333 702 ntBASIC3.75□□□□□ -1.81
Sdc1P18828 AC168881.1-201ENSMUST00000226018 430 ntBASIC3.75□□□□□ -1.81
Sdc1P18828 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Sdc1P18828 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Sdc1P18828 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Sdc1P18828 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.75□□□□□ -1.81
Sdc1P18828 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
Sdc1P18828 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Sdc1P18828 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC3.75□□□□□ -1.81
Sdc1P18828 AC102431.1-201ENSMUST00000223773 1449 ntBASIC3.75□□□□□ -1.81
Sdc1P18828 Gm42551-201ENSMUST00000197701 1573 ntBASIC3.75□□□□□ -1.81
Sdc1P18828 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Sdc1P18828 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
Sdc1P18828 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Sdc1P18828 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Sdc1P18828 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Sdc1P18828 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.75□□□□□ -1.81
Sdc1P18828 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Sdc1P18828 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Sdc1P18828 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Sdc1P18828 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Sdc1P18828 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm32444-201ENSMUST00000195147 3511 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm43341-201ENSMUST00000200104 1308 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Sdc1P18828 Gm15011-201ENSMUST00000117724 1480 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm29325-201ENSMUST00000190705 2528 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Sdc1P18828 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Sdc1P18828 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Sdc1P18828 Gm24429-201ENSMUST00000104076 132 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Mir105-201ENSMUST00000104655 80 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Sdc1P18828 Gm15148-201ENSMUST00000117602 156 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm13772-201ENSMUST00000118431 317 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm11737-201ENSMUST00000118713 468 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm12757-201ENSMUST00000119465 800 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm15019-201ENSMUST00000120148 434 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm13459-201ENSMUST00000121558 646 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm24965-201ENSMUST00000157922 106 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm24898-201ENSMUST00000158133 106 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm22261-201ENSMUST00000158691 324 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Ear-ps5-201ENSMUST00000164700 463 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Sdc1P18828 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Sdc1P18828 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Sdc1P18828 Gm18199-201ENSMUST00000173820 835 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Mir6416-201ENSMUST00000183664 117 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC3.74□□□□□ -1.81
Sdc1P18828 Gm3145-201ENSMUST00000188584 220 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm37527-201ENSMUST00000192406 3547 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm10292-202ENSMUST00000193165 585 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
Sdc1P18828 Trbv11-201ENSMUST00000194354 260 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm43828-201ENSMUST00000196890 639 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC3.74□□□□□ -1.81
Sdc1P18828 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
Sdc1P18828 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Sdc1P18828 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.74□□□□□ -1.81
Sdc1P18828 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Sdc1P18828 Gm19885-201ENSMUST00000212853 343 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Sdc1P18828 AC158803.3-201ENSMUST00000220024 211 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 AC155941.1-201ENSMUST00000220223 529 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 AC119894.1-201ENSMUST00000220399 350 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 AC211878.6-201ENSMUST00000221896 358 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 AC154576.2-203ENSMUST00000224736 253 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 AC154527.3-201ENSMUST00000225519 989 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Sdc1P18828 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Sdc1P18828 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Sdc1P18828 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Sdc1P18828 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Sdc1P18828 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Sdc1P18828 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
Sdc1P18828 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
Sdc1P18828 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Sdc1P18828 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Sdc1P18828 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Sdc1P18828 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Sdc1P18828 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Sdc1P18828 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
Sdc1P18828 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Sdc1P18828 Gm7269-201ENSMUST00000210819 1373 ntBASIC3.74□□□□□ -1.81
Sdc1P18828 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms