Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28194-201ENSMUST00000187412 484 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm18117-201ENSMUST00000187720 742 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28886-202ENSMUST00000187889 484 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28554-202ENSMUST00000189175 484 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm29213-202ENSMUST00000189703 484 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28851-202ENSMUST00000189757 484 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28461-201ENSMUST00000190023 484 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm43768-201ENSMUST00000198380 1258 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm36382-201ENSMUST00000198892 541 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm7825-201ENSMUST00000204046 416 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm44773-201ENSMUST00000207374 557 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm45276-201ENSMUST00000209549 1086 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm7128-201ENSMUST00000211639 533 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 AC153548.2-201ENSMUST00000219770 885 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.96□□□□□ -1.78
Cdx1P18111 AC123534.1-201ENSMUST00000224060 656 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Cdx1P18111 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Cdx1P18111 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Mir449a-201ENSMUST00000083641 91 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cdx1P18111 Gm42869-201ENSMUST00000199953 2121 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Cdx1P18111 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Cdx1P18111 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Cdx1P18111 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Cdx1P18111 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Cdx1P18111 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cdx1P18111 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Cdx1P18111 Gm14107-201ENSMUST00000117774 330 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm9078-201ENSMUST00000119126 617 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm12880-201ENSMUST00000120652 494 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm5383-201ENSMUST00000121177 617 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm13743-201ENSMUST00000121486 724 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm4912-201ENSMUST00000122212 1044 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC3.95□□□□□ -1.78
Cdx1P18111 Gm22601-201ENSMUST00000157595 250 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm25907-201ENSMUST00000158486 125 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm7609-204ENSMUST00000161424 461 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm22411-201ENSMUST00000175462 126 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm22002-201ENSMUST00000175622 125 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm10784-201ENSMUST00000178715 238 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm16378-201ENSMUST00000179168 342 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm28976-201ENSMUST00000188070 144 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm7496-201ENSMUST00000192573 1034 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC3.95□□□□□ -1.78
Cdx1P18111 Igkv2-107-201ENSMUST00000196000 313 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms