Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Mir27a-201ENSMUST00000083510 87 ntBASIC4.8□□□□□ -1.64
Srp54bE9PXC0 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Srp54bE9PXC0 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Srp54bE9PXC0 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Srp54bE9PXC0 AC122357.1-201ENSMUST00000221652 1515 ntBASIC4.8□□□□□ -1.64
Srp54bE9PXC0 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Srp54bE9PXC0 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Srp54bE9PXC0 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.8□□□□□ -1.64
Srp54bE9PXC0 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.8□□□□□ -1.64
Srp54bE9PXC0 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Srp54bE9PXC0 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.8□□□□□ -1.64
Srp54bE9PXC0 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Srp54bE9PXC0 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Srp54bE9PXC0 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Srp54bE9PXC0 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm22657-201ENSMUST00000104197 132 ntBASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm12039-201ENSMUST00000118219 180 ntBASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm11584-201ENSMUST00000120636 325 ntBASIC4.79□□□□□ -1.64
Srp54bE9PXC0 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm24113-201ENSMUST00000157477 276 ntBASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm28118-201ENSMUST00000185957 294 ntBASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm29668-201ENSMUST00000187802 315 ntBASIC4.79□□□□□ -1.64
Srp54bE9PXC0 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm37908-201ENSMUST00000195828 470 ntBASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm19761-201ENSMUST00000205372 391 ntBASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm44757-201ENSMUST00000206373 157 ntBASIC4.79□□□□□ -1.64
Srp54bE9PXC0 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm45269-201ENSMUST00000210359 282 ntBASIC4.79□□□□□ -1.64
Srp54bE9PXC0 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.79□□□□□ -1.64
Srp54bE9PXC0 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Srp54bE9PXC0 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm13250-201ENSMUST00000117209 753 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm12112-201ENSMUST00000117772 231 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm12465-201ENSMUST00000118591 300 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm11313-201ENSMUST00000118779 432 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Llph-ps1-201ENSMUST00000121281 390 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm26098-201ENSMUST00000157247 288 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Snora81-201ENSMUST00000157310 178 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm26085-201ENSMUST00000157900 116 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm22726-201ENSMUST00000158089 179 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm24931-201ENSMUST00000158324 107 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm18177-201ENSMUST00000188373 404 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm28116-201ENSMUST00000189064 387 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm43308-201ENSMUST00000197236 373 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm44816-201ENSMUST00000206666 477 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Gm45247-201ENSMUST00000210757 309 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Srp54bE9PXC0 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 AC154828.2-201ENSMUST00000220908 1070 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.78□□□□□ -1.64
Srp54bE9PXC0 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms