Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm7639-201ENSMUST00000212608 484 ntBASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Gm38105-201ENSMUST00000192112 2621 ntBASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Gm27392-201ENSMUST00000185041 101 ntBASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Gm29489-201ENSMUST00000188934 324 ntBASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Gm37300-201ENSMUST00000193327 280 ntBASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 AC115291.1-201ENSMUST00000226803 258 ntBASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Gm37018-201ENSMUST00000192441 3869 ntBASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a3E9PWQ3 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm23609-201ENSMUST00000104542 127 ntBASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm14711-201ENSMUST00000117056 217 ntBASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm13172-201ENSMUST00000118685 256 ntBASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm27538-201ENSMUST00000185065 294 ntBASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm10161-201ENSMUST00000091506 204 ntBASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Nup210l-202ENSMUST00000200410 5710 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm14365-201ENSMUST00000117535 587 ntBASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm12103-201ENSMUST00000121892 362 ntBASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm26404-201ENSMUST00000158498 109 ntBASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm29545-201ENSMUST00000188878 694 ntBASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm17966-201ENSMUST00000193453 594 ntBASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm17137-201ENSMUST00000164106 4371 ntBASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm43682-201ENSMUST00000202150 2090 ntBASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Gm20946-201ENSMUST00000212367 461 ntBASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 CT030184.2-201ENSMUST00000223064 263 ntBASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Col6a3E9PWQ3 Svet1-201ENSMUST00000209370 3940 ntBASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Gm32536-201ENSMUST00000205209 445 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 144.5 ms