Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm13214-201ENSMUST00000122137 408 ntBASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Gm44389-201ENSMUST00000203795 182 ntBASIC4.89□□□□□ -1.63
Scn3aA2ASI5 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.89□□□□□ -1.63
Scn3aA2ASI5 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.89□□□□□ -1.63
Scn3aA2ASI5 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 AC162183.1-202ENSMUST00000225434 904 ntBASIC4.89□□□□□ -1.63
Scn3aA2ASI5 AC122035.2-201ENSMUST00000228698 462 ntBASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Gm11398-201ENSMUST00000120330 320 ntBASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Gm13162-201ENSMUST00000121481 454 ntBASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Gm44032-201ENSMUST00000204841 166 ntBASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Gm18320-201ENSMUST00000211304 595 ntBASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Mir551b-201ENSMUST00000102165 98 ntBASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Gm7834-201ENSMUST00000117560 437 ntBASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 AC110816.1-201ENSMUST00000218559 980 ntBASIC4.88□□□□□ -1.63
Scn3aA2ASI5 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Mir346-201ENSMUST00000083547 98 ntBASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Scn3aA2ASI5 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Gm23554-201ENSMUST00000157818 110 ntBASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Gm43856-201ENSMUST00000197004 369 ntBASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.87□□□□□ -1.63
Scn3aA2ASI5 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Gm38126-201ENSMUST00000195297 4003 ntBASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Gm13501-201ENSMUST00000118477 979 ntBASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Gm23215-201ENSMUST00000178153 121 ntBASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Gm6214-201ENSMUST00000178845 541 ntBASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Gm4410-201ENSMUST00000199349 686 ntBASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.87□□□□□ -1.63
Scn3aA2ASI5 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.87□□□□□ -1.63
Scn3aA2ASI5 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Scn3aA2ASI5 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms