Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb1S4R1E0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb1S4R1E0 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.94■□□□□ 0.14
H2afb1S4R1E0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.94■□□□□ 0.14
H2afb1S4R1E0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb1S4R1E0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb1S4R1E0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.94■□□□□ 0.14
H2afb1S4R1E0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb1S4R1E0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb1S4R1E0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb1S4R1E0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.94■□□□□ 0.14
H2afb1S4R1E0 Gm8969-201ENSMUST00000199694 526 ntBASIC15.94■□□□□ 0.14
H2afb1S4R1E0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb1S4R1E0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb1S4R1E0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb1S4R1E0 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.94■□□□□ 0.14
H2afb1S4R1E0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb1S4R1E0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.93■□□□□ 0.14
H2afb1S4R1E0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
H2afb1S4R1E0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
H2afb1S4R1E0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.92■□□□□ 0.14
H2afb1S4R1E0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
H2afb1S4R1E0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
H2afb1S4R1E0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
H2afb1S4R1E0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
H2afb1S4R1E0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.92■□□□□ 0.14
H2afb1S4R1E0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
H2afb1S4R1E0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
H2afb1S4R1E0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
H2afb1S4R1E0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
H2afb1S4R1E0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
H2afb1S4R1E0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
H2afb1S4R1E0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
H2afb1S4R1E0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms