Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn9Q9Z0S7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn9Q9Z0S7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn9Q9Z0S7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn9Q9Z0S7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn9Q9Z0S7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.94■□□□□ 0.3
Cldn9Q9Z0S7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn9Q9Z0S7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn9Q9Z0S7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.94■□□□□ 0.3
Cldn9Q9Z0S7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn9Q9Z0S7 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.94■□□□□ 0.3
Cldn9Q9Z0S7 Gm10138-203ENSMUST00000206952 366 ntBASIC16.94■□□□□ 0.3
Cldn9Q9Z0S7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn9Q9Z0S7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn9Q9Z0S7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn9Q9Z0S7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn9Q9Z0S7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn9Q9Z0S7 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.93■□□□□ 0.3
Cldn9Q9Z0S7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn9Q9Z0S7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn9Q9Z0S7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn9Q9Z0S7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn9Q9Z0S7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn9Q9Z0S7 Mir6349-201ENSMUST00000184059 97 ntBASIC16.93■□□□□ 0.3
Cldn9Q9Z0S7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn9Q9Z0S7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cldn9Q9Z0S7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Cldn9Q9Z0S7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Cldn9Q9Z0S7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn9Q9Z0S7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn9Q9Z0S7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn9Q9Z0S7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn9Q9Z0S7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn9Q9Z0S7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn9Q9Z0S7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn9Q9Z0S7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn9Q9Z0S7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn9Q9Z0S7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn9Q9Z0S7 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.92■□□□□ 0.3
Cldn9Q9Z0S7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn9Q9Z0S7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cldn9Q9Z0S7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn9Q9Z0S7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.9■□□□□ 0.3
Cldn9Q9Z0S7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn9Q9Z0S7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn9Q9Z0S7 Gm11249-201ENSMUST00000117071 859 ntBASIC16.9■□□□□ 0.3
Cldn9Q9Z0S7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn9Q9Z0S7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.9■□□□□ 0.3
Cldn9Q9Z0S7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn9Q9Z0S7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cldn9Q9Z0S7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn9Q9Z0S7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cldn9Q9Z0S7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cldn9Q9Z0S7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cldn9Q9Z0S7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn9Q9Z0S7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.89■□□□□ 0.29
Cldn9Q9Z0S7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn9Q9Z0S7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn9Q9Z0S7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn9Q9Z0S7 Gm15375-201ENSMUST00000119510 849 ntBASIC16.89■□□□□ 0.29
Cldn9Q9Z0S7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.89■□□□□ 0.29
Cldn9Q9Z0S7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.89■□□□□ 0.29
Cldn9Q9Z0S7 Mir8112-201ENSMUST00000184382 131 ntBASIC16.89■□□□□ 0.29
Cldn9Q9Z0S7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cldn9Q9Z0S7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn9Q9Z0S7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn9Q9Z0S7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn9Q9Z0S7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Cldn9Q9Z0S7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.88■□□□□ 0.29
Cldn9Q9Z0S7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn9Q9Z0S7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn9Q9Z0S7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn9Q9Z0S7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Cldn9Q9Z0S7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.88■□□□□ 0.29
Cldn9Q9Z0S7 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.88■□□□□ 0.29
Cldn9Q9Z0S7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.88■□□□□ 0.29
Cldn9Q9Z0S7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cldn9Q9Z0S7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.88■□□□□ 0.29
Cldn9Q9Z0S7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cldn9Q9Z0S7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn9Q9Z0S7 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms