Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.25■□□□□ 0.51
Smarcb1Q9Z0H3 Idnk-204ENSMUST00000226010 1898 ntBASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Gm16061-201ENSMUST00000122167 857 ntBASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Gm13474-201ENSMUST00000122466 815 ntBASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Gm9731-201ENSMUST00000209480 747 ntBASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Il3ra-202ENSMUST00000223589 738 ntBASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.24■□□□□ 0.51
Smarcb1Q9Z0H3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.23■□□□□ 0.51
Smarcb1Q9Z0H3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcb1Q9Z0H3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcb1Q9Z0H3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcb1Q9Z0H3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcb1Q9Z0H3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcb1Q9Z0H3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcb1Q9Z0H3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcb1Q9Z0H3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcb1Q9Z0H3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcb1Q9Z0H3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.23■□□□□ 0.51
Smarcb1Q9Z0H3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.23■□□□□ 0.51
Smarcb1Q9Z0H3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcb1Q9Z0H3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcb1Q9Z0H3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcb1Q9Z0H3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcb1Q9Z0H3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcb1Q9Z0H3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcb1Q9Z0H3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcb1Q9Z0H3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcb1Q9Z0H3 Mir5130-201ENSMUST00000175160 84 ntBASIC18.22■□□□□ 0.51
Smarcb1Q9Z0H3 Mir8112-201ENSMUST00000184382 131 ntBASIC18.22■□□□□ 0.51
Smarcb1Q9Z0H3 Gm7791-201ENSMUST00000219066 539 ntBASIC18.22■□□□□ 0.51
Smarcb1Q9Z0H3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Smarcb1Q9Z0H3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcb1Q9Z0H3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcb1Q9Z0H3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcb1Q9Z0H3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcb1Q9Z0H3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcb1Q9Z0H3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smarcb1Q9Z0H3 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.21■□□□□ 0.51
Smarcb1Q9Z0H3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Smarcb1Q9Z0H3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcb1Q9Z0H3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcb1Q9Z0H3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcb1Q9Z0H3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.21■□□□□ 0.51
Smarcb1Q9Z0H3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcb1Q9Z0H3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcb1Q9Z0H3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Smarcb1Q9Z0H3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcb1Q9Z0H3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcb1Q9Z0H3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Smarcb1Q9Z0H3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Smarcb1Q9Z0H3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Smarcb1Q9Z0H3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcb1Q9Z0H3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcb1Q9Z0H3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcb1Q9Z0H3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.2■□□□□ 0.5
Smarcb1Q9Z0H3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.2■□□□□ 0.5
Smarcb1Q9Z0H3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcb1Q9Z0H3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcb1Q9Z0H3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcb1Q9Z0H3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Smarcb1Q9Z0H3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcb1Q9Z0H3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcb1Q9Z0H3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcb1Q9Z0H3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.19■□□□□ 0.5
Smarcb1Q9Z0H3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcb1Q9Z0H3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcb1Q9Z0H3 Gm10013-201ENSMUST00000106074 672 ntBASIC18.19■□□□□ 0.5
Smarcb1Q9Z0H3 Gm17661-201ENSMUST00000170317 270 ntBASIC18.19■□□□□ 0.5
Smarcb1Q9Z0H3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Smarcb1Q9Z0H3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcb1Q9Z0H3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Smarcb1Q9Z0H3 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.19■□□□□ 0.5
Smarcb1Q9Z0H3 Gm18032-201ENSMUST00000222541 538 ntBASIC18.19■□□□□ 0.5
Smarcb1Q9Z0H3 Fst-202ENSMUST00000223640 2612 ntBASIC18.19■□□□□ 0.5
Smarcb1Q9Z0H3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcb1Q9Z0H3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcb1Q9Z0H3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.19■□□□□ 0.5
Smarcb1Q9Z0H3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms