Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.94□□□□□ -0.02
Cx3cr1Q9Z0D9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cx3cr1Q9Z0D9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cx3cr1Q9Z0D9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Cx3cr1Q9Z0D9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cx3cr1Q9Z0D9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.94□□□□□ -0.02
Cx3cr1Q9Z0D9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cx3cr1Q9Z0D9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cx3cr1Q9Z0D9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 Gm43017-201ENSMUST00000198296 752 ntBASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cx3cr1Q9Z0D9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Gm27454-201ENSMUST00000185090 204 ntBASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Gm9988-201ENSMUST00000069786 435 ntBASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cx3cr1Q9Z0D9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cx3cr1Q9Z0D9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Reep4-203ENSMUST00000226563 1444 ntBASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cr1Q9Z0D9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms