Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh17Q9R100 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh17Q9R100 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh17Q9R100 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh17Q9R100 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh17Q9R100 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh17Q9R100 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdh17Q9R100 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh17Q9R100 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh17Q9R100 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.15■□□□□ 0.34
Cdh17Q9R100 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.15■□□□□ 0.34
Cdh17Q9R100 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.15■□□□□ 0.34
Cdh17Q9R100 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh17Q9R100 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cdh17Q9R100 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh17Q9R100 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh17Q9R100 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh17Q9R100 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh17Q9R100 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh17Q9R100 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdh17Q9R100 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh17Q9R100 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh17Q9R100 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cdh17Q9R100 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdh17Q9R100 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdh17Q9R100 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cdh17Q9R100 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh17Q9R100 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh17Q9R100 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh17Q9R100 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh17Q9R100 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Gm13401-201ENSMUST00000117074 291 ntBASIC17.13■□□□□ 0.33
Cdh17Q9R100 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh17Q9R100 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh17Q9R100 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh17Q9R100 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cdh17Q9R100 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh17Q9R100 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh17Q9R100 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh17Q9R100 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
Cdh17Q9R100 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cdh17Q9R100 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh17Q9R100 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.12■□□□□ 0.33
Cdh17Q9R100 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cdh17Q9R100 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.12■□□□□ 0.33
Cdh17Q9R100 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.12■□□□□ 0.33
Cdh17Q9R100 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh17Q9R100 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh17Q9R100 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh17Q9R100 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh17Q9R100 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh17Q9R100 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh17Q9R100 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms