Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Nr2e3Q9QXZ7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr2e3Q9QXZ7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nr2e3Q9QXZ7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nr2e3Q9QXZ7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nr2e3Q9QXZ7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr2e3Q9QXZ7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr2e3Q9QXZ7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr2e3Q9QXZ7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.87■□□□□ 0.77
Nr2e3Q9QXZ7 Gm715-201ENSMUST00000117865 831 ntBASIC19.87■□□□□ 0.77
Nr2e3Q9QXZ7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr2e3Q9QXZ7 Gm4974-201ENSMUST00000209974 875 ntBASIC19.87■□□□□ 0.77
Nr2e3Q9QXZ7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr2e3Q9QXZ7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Nr2e3Q9QXZ7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Nr2e3Q9QXZ7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr2e3Q9QXZ7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nr2e3Q9QXZ7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr2e3Q9QXZ7 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.86■□□□□ 0.77
Nr2e3Q9QXZ7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr2e3Q9QXZ7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr2e3Q9QXZ7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr2e3Q9QXZ7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr2e3Q9QXZ7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.86■□□□□ 0.77
Nr2e3Q9QXZ7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr2e3Q9QXZ7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr2e3Q9QXZ7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr2e3Q9QXZ7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr2e3Q9QXZ7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr2e3Q9QXZ7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nr2e3Q9QXZ7 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.86■□□□□ 0.77
Nr2e3Q9QXZ7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr2e3Q9QXZ7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nr2e3Q9QXZ7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nr2e3Q9QXZ7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.85■□□□□ 0.77
Nr2e3Q9QXZ7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Nr2e3Q9QXZ7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nr2e3Q9QXZ7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr2e3Q9QXZ7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.85■□□□□ 0.77
Nr2e3Q9QXZ7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nr2e3Q9QXZ7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nr2e3Q9QXZ7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr2e3Q9QXZ7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr2e3Q9QXZ7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr2e3Q9QXZ7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Nr2e3Q9QXZ7 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.84■□□□□ 0.77
Nr2e3Q9QXZ7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.84■□□□□ 0.77
Nr2e3Q9QXZ7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.84■□□□□ 0.77
Nr2e3Q9QXZ7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.84■□□□□ 0.77
Nr2e3Q9QXZ7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nr2e3Q9QXZ7 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.84■□□□□ 0.77
Nr2e3Q9QXZ7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nr2e3Q9QXZ7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr2e3Q9QXZ7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr2e3Q9QXZ7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.84■□□□□ 0.77
Nr2e3Q9QXZ7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nr2e3Q9QXZ7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.83■□□□□ 0.77
Nr2e3Q9QXZ7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr2e3Q9QXZ7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr2e3Q9QXZ7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr2e3Q9QXZ7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr2e3Q9QXZ7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nr2e3Q9QXZ7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Nr2e3Q9QXZ7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.83■□□□□ 0.77
Nr2e3Q9QXZ7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nr2e3Q9QXZ7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr2e3Q9QXZ7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nr2e3Q9QXZ7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nr2e3Q9QXZ7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nr2e3Q9QXZ7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nr2e3Q9QXZ7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nr2e3Q9QXZ7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nr2e3Q9QXZ7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nr2e3Q9QXZ7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms